LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

CCoAOMT

Caffeoyl-CoA O-methyltransferase family

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmePhenylpropanoid biosynthesis
Public candidate IDs
2,210
Species with candidates
80
Species with assignments
80
Source assignments
2,527
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers2,210 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
2,527
Public candidate count
2,210
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 18550 No matrix
Ocimum basilicumNepetoideae · Ocimum Stable locus 9750 Available
Pogostemon cablinLamioideae · Pogostemon Stable locus 9150 Available
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 8750 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 8150 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 6150 No matrix
Perilla frutescensNepetoideae · Perilla Stable locus 5850 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 5650 Available
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 5150 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 4848 No matrix
Nepeta catariaNepetoideae · Nepeta Stable locus 4646 Available
Salvia rosmarinusNepetoideae · Salvia Stable locus 4141 Available
Salvia splendensNepetoideae · Salvia Stable locus 4040 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 3838 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 3737 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 3737 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 3434 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 3434 No matrix
Isodon serraNepetoideae · Isodon Stable locus 3434 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 3333 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 3333 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 3333 Available
Origanum vulgareNepetoideae · Origanum Stable locus 3232 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 3131 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 3131 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 3131 Available
Clinopodium gracileNepetoideae · Clinopodium Stable locus 3030 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 3030 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 3030 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 3030 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 3030 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 2929 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 2828 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 2828 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 2828 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 2727 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 2727 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 2626 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 2626 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 2525 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 2525 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 2525 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 2424 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 2424 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 2424 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 2424 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 2323 Available
Rotheca myricoidesAjugoideae · Rotheca Stable locus 2323 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 2222 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 2222 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 2121 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 2020 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 2020 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 2020 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 2020 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 2020 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 2020 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 1919 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 1818 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 1818 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 1818 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 1818 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 1818 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 1818 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 1818 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 1717 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 1717 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 1717 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 1717 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 1616 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 1616 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 1616 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 1515 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 1515 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 1515 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 1515 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 1515 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 1414 No matrix
Lamium albumLamioideae · Lamium Stable locus 1313 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 1313 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
PHFR_c60441_g1_i2_len_637
Phlomis fruticosaPhenylpropanoid · CCoAOMTblast+hmm High 91.8%161.1
MESP_c35038_g1_i1_len_674
Mentha spicataPhenylpropanoid · CCoAOMTblast+hmm High 69.6%160.9
Pat_A23G055000.m1
Pogostemon cablinPhenylpropanoid · CCoAOMTblast+hmm High 62.0%160.9
Ls4g17630.1
Leonurus sibiricusPhenylpropanoid · CCoAOMTblast+hmm High 69.9%160.6
g31288.t1
Nepeta catariaPhenylpropanoid · CCoAOMTblast+hmm High 64.9%160.6
DRSE_g16813.t1
Drepanocaryum sewerzowiiPhenylpropanoid · CCoAOMTblast+hmm High 64.6%160.3
g18767.t1
Nepeta mussiniiPhenylpropanoid · CCoAOMTblast+hmm High 62.5%160.2
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_41.1106.mRNA1
Stenogyne calaminthoidesPhenylpropanoid · CCoAOMTblast+hmm High 68.8%159.9
ocimum_sanctum_Ote100063910021
Ocimum tenuiflorumPhenylpropanoid · CCoAOMTblast+hmm High 66.8%159.6
382699.g40.t1
Ocimum basilicumPhenylpropanoid · CCoAOMTblast+hmm High 58.4%159.5
24:ILLG5G329.38m1
Isodon lophanthoidesPhenylpropanoid · CCoAOMTblast+hmm High 62.8%159.4
evm.model.chr8.2792
Prunella vulgarisPhenylpropanoid · CCoAOMTblast+hmm High 69.4%158.9
371778.g1.t1
Ocimum basilicumPhenylpropanoid · CCoAOMTblast+hmm High 66.1%158.4
g18767.t1.2.5b2c7c79
Nepeta mussiniiPhenylpropanoid · CCoAOMTblast+hmm High 61.3%157.9
1964.g106.t1
Ocimum basilicumPhenylpropanoid · CCoAOMTblast+hmm High 66.1%157.6
LELE_c33768_g4_i2_len_919
Leonotis leonurusPhenylpropanoid · CCoAOMTblast+hmm High 74.0%156.9
371778.g1.t1.1.5db1524c
Ocimum basilicumPhenylpropanoid · CCoAOMTblast+hmm High 66.3%156.1
522.g97.t1
Ocimum basilicumPhenylpropanoid · CCoAOMTblast+hmm High 68.3%155.5
382699.g43.t1
Ocimum basilicumPhenylpropanoid · CCoAOMTblast+hmm High 62.8%155.4
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_41.1105.mRNA1
Stenogyne calaminthoidesPhenylpropanoid · CCoAOMTblast+hmm High 74.9%154.2
AGFO_c49311_g1_i1_len_453
Agastache foeniculumPhenylpropanoid · CCoAOMTblast+hmm High 73.4%153.7
Mlonscaffold_7_length_366213000161220.1.v1.326
Mentha longifoliaPhenylpropanoid · CCoAOMTblast+hmm High 65.6%153.2
TECA_c15252_g2_i1_len_579
Teucrium canadensePhenylpropanoid · CCoAOMTblast+hmm High 69.6%151.2
Teucrium_chamaedrys__Tcha162217
Teucrium chamaedrysPhenylpropanoid · CCoAOMTblast+hmm High 67.4%149.5
evm.model.ptg000011l.2288
Isodon serraPhenylpropanoid · CCoAOMTblast+hmm High 62.0%148.1
ocimum_sanctum_Ote100274940031
Ocimum tenuiflorumPhenylpropanoid · CCoAOMTblast+hmm High 83.0%147.0
MEOF_c14705_g2_i1_len_637
Melissa officinalisPhenylpropanoid · CCoAOMTblast+hmm High 72.0%146.8
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_41.1103.mRNA1
Stenogyne calaminthoidesPhenylpropanoid · CCoAOMTblast+hmm High 79.7%139.6
PEAT_c20045_g1_i1_len_391
Perovskia atriplicifoliaPhenylpropanoid · CCoAOMTblast+hmm High 96.2%139.4
COPY_c29325_g1_i1_len_334
Cornutia pyramidataPhenylpropanoid · CCoAOMTblast+hmm High 94.6%136.6
Mc6g03970.1
Mosla chinensisPhenylpropanoid · CCoAOMTblast+hmm High 63.2%135.9
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_43.1032.mRNA1
Stenogyne calaminthoidesPhenylpropanoid · CCoAOMTblast+hmm High 56.2%133.1
evm.model.LG03.407
Clinopodium barosmumPhenylpropanoid · CCoAOMTblast+hmm High 67.5%132.8
ocimum_sanctum_Ote100023400001
Ocimum tenuiflorumPhenylpropanoid · CCoAOMTblast+hmm High 60.8%132.3
evm.model.LG07.1195
Clinopodium barosmumPhenylpropanoid · CCoAOMTblast+hmm High 76.9%132.0
ocimum_sanctum_Ote100023400031
Ocimum tenuiflorumPhenylpropanoid · CCoAOMTblast+hmm High 60.9%131.1
MAVU_c15516_g1_i1_len_576
Marrubium vulgarePhenylpropanoid · CCoAOMTblast+hmm High 93.7%130.8
BAPS_c22245_g1_i1_len_707
Ballota pseudodictamnusPhenylpropanoid · CCoAOMTblast+hmm High 93.0%129.2
STOF_c63373_g1_i2_len_1130
Stachys officinalisPhenylpropanoid · CCoAOMTblast+hmm High 60.8%128.5
TECA_c31934_g3_i1_len_657
Teucrium canadensePhenylpropanoid · CCoAOMTblast+hmm High 71.2%126.9
MEOF_c33492_g1_i1_len_313
Melissa officinalisPhenylpropanoid · CCoAOMTblast+hmm High 98.1%126.3
SAOF_c5692_g1_i1_len_526
Salvia officinalisPhenylpropanoid · CCoAOMTblast+hmm High 82.3%126.1
TECA_c16380_g1_i1_len_574
Teucrium canadensePhenylpropanoid · CCoAOMTblast+hmm High 69.3%124.9
g17950.t1
Hyssopus officinalisPhenylpropanoid · CCoAOMTblast+hmm High 73.3%123.6
origanum_vulgare_739.g9.t1.1.5db0b542
Origanum vulgarePhenylpropanoid · CCoAOMTblast+hmm High 81.3%123.3
g12725.t1
Salvia sclareaPhenylpropanoid · CCoAOMTblast+hmm High 75.7%123.2
COCA_c63479_g1_i1_len_1519
Collinsonia canadensisPhenylpropanoid · CCoAOMTblast+hmm High 80.1%123.0
PHFR_c60810_g2_i1_len_331
Phlomis fruticosaPhenylpropanoid · CCoAOMTblast+hmm High 87.3%123.0
PEAT_c41632_g1_i6_len_2084
Perovskia atriplicifoliaPhenylpropanoid · CCoAOMTblast+hmm High 81.0%122.9
THVU_c72781_g1_i1_len_1346
Thymus vulgarisPhenylpropanoid · CCoAOMTblast+hmm High 73.9%122.8