LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

CCoAOMT

Caffeoyl-CoA O-methyltransferase family

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmePhenylpropanoid biosynthesis
Public candidate IDs
2,210
Species with candidates
80
Species with assignments
80
Source assignments
2,527
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers2,210 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
2,527
Public candidate count
2,210
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 18550 No matrix
Ocimum basilicumNepetoideae · Ocimum Stable locus 9750 Available
Pogostemon cablinLamioideae · Pogostemon Stable locus 9150 Available
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 8750 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 8150 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 6150 No matrix
Perilla frutescensNepetoideae · Perilla Stable locus 5850 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 5650 Available
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 5150 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 4848 No matrix
Nepeta catariaNepetoideae · Nepeta Stable locus 4646 Available
Salvia rosmarinusNepetoideae · Salvia Stable locus 4141 Available
Salvia splendensNepetoideae · Salvia Stable locus 4040 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 3838 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 3737 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 3737 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 3434 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 3434 No matrix
Isodon serraNepetoideae · Isodon Stable locus 3434 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 3333 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 3333 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 3333 Available
Origanum vulgareNepetoideae · Origanum Stable locus 3232 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 3131 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 3131 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 3131 Available
Clinopodium gracileNepetoideae · Clinopodium Stable locus 3030 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 3030 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 3030 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 3030 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 3030 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 2929 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 2828 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 2828 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 2828 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 2727 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 2727 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 2626 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 2626 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 2525 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 2525 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 2525 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 2424 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 2424 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 2424 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 2424 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 2323 Available
Rotheca myricoidesAjugoideae · Rotheca Stable locus 2323 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 2222 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 2222 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 2121 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 2020 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 2020 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 2020 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 2020 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 2020 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 2020 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 1919 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 1818 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 1818 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 1818 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 1818 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 1818 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 1818 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 1818 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 1717 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 1717 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 1717 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 1717 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 1616 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 1616 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 1616 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 1515 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 1515 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 1515 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 1515 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 1515 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 1414 No matrix
Lamium albumLamioideae · Lamium Stable locus 1313 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 1313 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
rna-gnl|WGS:QFCC|chr17_48209194_48210451.mrna1
Perilla frutescensPhenylpropanoid · CCoAOMTblast+hmm High 72.0%201.7
HYSU_c27927_g1_i2_len_1061
Hyptis suaveolensPhenylpropanoid · CCoAOMTblast+hmm High 95.0%201.6
Sbow06G0036370.1
Salvia bowleyanaPhenylpropanoid · CCoAOMTblast+hmm High 84.6%201.6
AG34_scaffold8_09820T
Agastache rugosaPhenylpropanoid · CCoAOMTblast+hmm High 95.5%201.5
AGFO_c28513_g1_i1_len_992
Agastache foeniculumPhenylpropanoid · CCoAOMTblast+hmm High 95.5%201.5
Roff8300509880
Salvia rosmarinusPhenylpropanoid · CCoAOMTblast+hmm High 94.2%201.5
evm.model.Chr02.251
Callicarpa nudifloraPhenylpropanoid · CCoAOMTblast+hmm High 89.5%201.5
scutellaria_barbata_GWHPAOTP004038
Scutellaria barbataPhenylpropanoid · CCoAOMTblast+hmm High 92.9%201.5
Pat_A02G124300.m1
Pogostemon cablinPhenylpropanoid · CCoAOMTblast+hmm High 92.1%201.4
Pat_B02G096200.m1
Pogostemon cablinPhenylpropanoid · CCoAOMTblast+hmm High 94.4%201.4
PEBA_c36318_g1_i1_len_1017
Petraeovitex bambusetoriumPhenylpropanoid · CCoAOMTblast+hmm High 93.7%201.3
SAOF_c15332_g1_i2_len_1013
Salvia officinalisPhenylpropanoid · CCoAOMTblast+hmm High 94.4%201.3
Sch000028417
Schizonepeta tenuifoliaPhenylpropanoid · CCoAOMTblast+hmm High 90.2%201.3
380861.g19.t1
Ocimum basilicumPhenylpropanoid · CCoAOMTblast+hmm High 69.2%201.2
BAPS_c15127_g1_i2_len_1130
Ballota pseudodictamnusPhenylpropanoid · CCoAOMTblast+hmm High 93.1%201.2
COPY_c68909_g1_i3_len_1373
Cornutia pyramidataPhenylpropanoid · CCoAOMTblast+hmm High 89.8%201.2
LAAN_c53480_g1_i2_len_987
Lavandula angustifoliaPhenylpropanoid · CCoAOMTblast+hmm High 92.5%201.2
LECA_c23249_g1_i1_len_999
Leonurus cardiacaPhenylpropanoid · CCoAOMTblast+hmm High 91.4%201.2
Lj7g06910.1
Leonurus japonicusPhenylpropanoid · CCoAOMTblast+hmm High 94.4%201.1
Ls5g29240.1
Leonurus sibiricusPhenylpropanoid · CCoAOMTblast+hmm High 94.9%201.1
PEBA_c45019_g2_i1_len_1278
Petraeovitex bambusetoriumPhenylpropanoid · CCoAOMTblast+hmm High 75.4%201.1
Smil05G0030680.1.v1.484
Salvia miltiorrhizaPhenylpropanoid · CCoAOMTblast+hmm High 93.0%201.1
LELE_c32124_g1_i1_len_957
Leonotis leonurusPhenylpropanoid · CCoAOMTblast+hmm High 90.9%201.0
MEPI_c57000_g1_i4_len_934
Mentha x piperitaPhenylpropanoid · CCoAOMTblast+hmm High 94.6%201.0
evm.model.chr6.1546
Prunella vulgarisPhenylpropanoid · CCoAOMTblast+hmm High 94.1%200.8
tectona_grandis_Tg11g14310.t1
Tectona grandisPhenylpropanoid · CCoAOMTblast+hmm High 71.4%200.8
PEBA_c36318_g2_i1_len_1064
Petraeovitex bambusetoriumPhenylpropanoid · CCoAOMTblast+hmm High 91.1%200.7
XP_042061956.1
Salvia splendensPhenylpropanoid · CCoAOMTblast+hmm High 92.6%200.7
Dru_2G0039160.1
Dracocephalum rupestrePhenylpropanoid · CCoAOMTblast+hmm High 89.1%200.6
Dru_2G0039180.1
Dracocephalum rupestrePhenylpropanoid · CCoAOMTblast+hmm High 89.5%200.5
Dru_2G0039180.2
Dracocephalum rupestrePhenylpropanoid · CCoAOMTblast+hmm High 89.5%200.5
KAL8533155.1
Phlomoides rotataPhenylpropanoid · CCoAOMTblast+hmm High 94.0%200.5
origanum_vulgare_258.g50.t1
Origanum vulgarePhenylpropanoid · CCoAOMTblast+hmm High 67.5%200.5
MESP_c34622_g1_i3_len_1042
Mentha spicataPhenylpropanoid · CCoAOMTblast+hmm High 94.2%200.4
Pat_B02G198600.m1
Pogostemon cablinPhenylpropanoid · CCoAOMTblast+hmm High 93.2%200.3
TECA_c23207_g1_i1_len_1023
Teucrium canadensePhenylpropanoid · CCoAOMTblast+hmm High 90.8%200.3
Es5A.G171400.t1
Elsholtzia splendensPhenylpropanoid · CCoAOMTblast+hmm High 70.9%200.2
KAL1534605.1
Salvia divinorumPhenylpropanoid · CCoAOMTblast+hmm High 93.8%200.2
Teucrium_chamaedrys__Tcha20166
Teucrium chamaedrysPhenylpropanoid · CCoAOMTblast+hmm High 90.4%200.2
g2122.t1
Nepeta catariaPhenylpropanoid · CCoAOMTblast+hmm High 95.0%200.2
DRSE_g9195.t1
Drepanocaryum sewerzowiiPhenylpropanoid · CCoAOMTblast+hmm High 69.2%200.1
PLBA_c34571_g1_i1_len_940
Plectranthus barbatusPhenylpropanoid · CCoAOMTblast+hmm High 67.0%200.1
Teucrium_chamaedrys__Tcha31058
Teucrium chamaedrysPhenylpropanoid · CCoAOMTblast+hmm High 90.4%200.1
Teucrium_chamaedrys__Tcha59166
Teucrium chamaedrysPhenylpropanoid · CCoAOMTblast+hmm High 90.4%200.1
XP_047953434.1
Salvia hispanicaPhenylpropanoid · CCoAOMTblast+hmm High 90.7%200.1
XP_047977004.1
Salvia hispanicaPhenylpropanoid · CCoAOMTblast+hmm High 90.7%200.1
rna-gnl|WGS:QIYW|chr09_04521328_04522402.mrna1
Perilla citriodoraPhenylpropanoid · CCoAOMTblast+hmm High 71.8%200.1
rna-gnl|WGS:QIYW|chr09_04521328_04522402.mrna1
Perilla frutescens var. hirtellaPhenylpropanoid · CCoAOMTblast+hmm High 71.8%200.1
Es7A.G228500.t1
Elsholtzia splendensPhenylpropanoid · CCoAOMTblast+hmm High 93.7%200.0
Es7B.G228300.t1
Elsholtzia splendensPhenylpropanoid · CCoAOMTblast+hmm High 93.7%200.0