LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

LAC

LAC enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmePhenylpropanoid biosynthesis
Public candidate IDs
4,000
Species with candidates
80
Species with assignments
80
Source assignments
10,870
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers4,000 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
10,870
Public candidate count
4,000
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Ocimum basilicumNepetoideae · Ocimum Stable locus 43050 Available
Pogostemon cablinLamioideae · Pogostemon Stable locus 42750 Available
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 41150 No matrix
Nepeta catariaNepetoideae · Nepeta Stable locus 31550 Available
Salvia splendensNepetoideae · Salvia Stable locus 25750 No matrix
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 24950 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 23950 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 22550 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 21150 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 19750 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 19250 Available
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 18950 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 17050 Available
Origanum vulgareNepetoideae · Origanum Stable locus 17050 No matrix
Perilla frutescensNepetoideae · Perilla Stable locus 16350 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 16350 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 16050 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 15150 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 15050 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 14950 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 14850 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 14550 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 14350 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 14350 Available
Cornutia pyramidataPremnoideae · Cornutia Stable locus 14250 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 13950 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 13950 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 13450 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 13450 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 13350 No matrix
Isodon serraNepetoideae · Isodon Stable locus 13150 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 12950 Available
Marmoritis complanataNepetoideae · Marmoritis Stable locus 12650 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 12350 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 12050 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 11750 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 11650 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 11350 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 11250 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 11150 Available
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 11050 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 10950 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 10650 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 10450 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 10350 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 10250 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 10150 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 10150 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 9950 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 9850 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 9850 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 9650 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 9650 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 9550 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 9550 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 9450 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 9450 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 9350 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 9350 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 9350 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 9150 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 9150 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 8950 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 8850 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 8850 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 8750 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 8750 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 8650 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 8550 No matrix
Lamium albumLamioideae · Lamium Stable locus 8550 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 8450 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 8450 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 8450 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 8450 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 8350 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 8250 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 8250 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 7950 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 7850 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 5750 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
Teucrium_chamaedrys__Tcha105199
Teucrium chamaedrysPhenylpropanoid · LACblast+hmm High 74.8%801.7
AJRE_c42268_g1_i1_len_2126
Ajuga reptansPhenylpropanoid · LACblast+hmm High 74.9%801.6
XP_047981716.1
Salvia hispanicaPhenylpropanoid · LACblast+hmm High 77.7%801.5
g16515.t1
Hyssopus officinalisPhenylpropanoid · LACblast+hmm High 77.8%801.5
g26291.t1_g26292.t1
Nepeta catariaPhenylpropanoid · LACblast+hmm High 74.2%801.5
GWHPBJVA002414
Thymus quinquecostatusPhenylpropanoid · LACblast+hmm High 73.0%801.4
MEPI_c61068_g1_i1_len_2601
Mentha x piperitaPhenylpropanoid · LACblast+hmm High 75.5%801.4
LYAM_c25754_g1_i1_len_2189
Lycopus americanusPhenylpropanoid · LACblast+hmm High 74.4%801.1
COCA_c71065_g4_i2_len_2017
Collinsonia canadensisPhenylpropanoid · LACblast+hmm High 73.7%800.7
XP_042036657.1
Salvia splendensPhenylpropanoid · LACblast+hmm High 74.4%800.7
KAL8459218.1
Phlomoides rotataPhenylpropanoid · LACblast+hmm High 79.2%800.6
PEAT_c34572_g2_i1_len_2122
Perovskia atriplicifoliaPhenylpropanoid · LACblast+hmm High 76.7%800.6
PHFR_c64446_g1_i1_len_1968
Phlomis fruticosaPhenylpropanoid · LACblast+hmm High 77.8%800.6
Teucrium_chamaedrys__Tcha191165
Teucrium chamaedrysPhenylpropanoid · LACblast+hmm High 74.6%800.6
Dru_1G0028880.1
Dracocephalum rupestrePhenylpropanoid · LACblast+hmm High 75.2%800.5
Mc9g13460.1
Mosla chinensisPhenylpropanoid · LACblast+hmm High 76.0%800.0
Teum.01G014420.1
Teucrium marumPhenylpropanoid · LACblast+hmm High 76.2%800.0
Teum.01G014420.2
Teucrium marumPhenylpropanoid · LACblast+hmm High 76.2%800.0
evm.model.LG04.506
Clinopodium barosmumPhenylpropanoid · LACblast+hmm High 76.8%799.9
Clgra_020928-T1
Clinopodium gracilePhenylpropanoid · LACblast+hmm High 78.1%799.8
Roff10280031210
Salvia rosmarinusPhenylpropanoid · LACblast+hmm High 79.5%799.8
GlLon_022068-T1
Glechoma longitubaPhenylpropanoid · LACblast+hmm High 76.4%799.7
LELE_c25200_g1_i1_len_2053
Leonotis leonurusPhenylpropanoid · LACblast+hmm High 76.3%799.6
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_5.819.mRNA1
Stenogyne calaminthoidesPhenylpropanoid · LACblast+hmm High 76.3%799.6
GLHE_c67220_g1_i1_len_2363
Glechoma hederaceaPhenylpropanoid · LACblast+hmm High 76.2%799.5
HOSA_c21949_g1_i1_len_2044
Holmskioldia sanguineaPhenylpropanoid · LACblast+hmm High 76.0%799.5
MEPI_c54522_g1_i2_len_1856
Mentha x piperitaPhenylpropanoid · LACblast+hmm High 77.6%799.5
SAOF_c27325_g1_i1_len_2149
Salvia officinalisPhenylpropanoid · LACblast+hmm High 77.0%799.5
evm.model.chr14.1408
Prunella vulgarisPhenylpropanoid · LACblast+hmm High 74.2%799.3
Dru_6G0027620.1
Dracocephalum rupestrePhenylpropanoid · LACblast+hmm High 78.1%799.2
MEOF_c20511_g1_i1_len_2204
Melissa officinalisPhenylpropanoid · LACblast+hmm High 75.7%799.2
origanum_vulgare_402.g36.t1
Origanum vulgarePhenylpropanoid · LACblast+hmm High 73.5%799.1
LYAM_c30449_g1_i1_len_1992
Lycopus americanusPhenylpropanoid · LACblast+hmm High 74.8%799.0
PEBA_c39614_g1_i1_len_2141
Petraeovitex bambusetoriumPhenylpropanoid · LACblast+hmm High 74.2%799.0
MEPI_c50985_g1_i2_len_1692
Mentha x piperitaPhenylpropanoid · LACblast+hmm High 75.0%798.9
evm.model.ptg000007l.456
Isodon serraPhenylpropanoid · LACblast+hmm High 78.3%798.9
COCA_c67630_g1_i1_len_1990
Collinsonia canadensisPhenylpropanoid · LACblast+hmm High 75.1%798.7
MEOF_c41068_g1_i1_len_2037
Melissa officinalisPhenylpropanoid · LACblast+hmm High 75.5%798.5
Roff3819900435620
Salvia rosmarinusPhenylpropanoid · LACblast+hmm High 75.7%798.5
XP_047962266.1
Salvia hispanicaPhenylpropanoid · LACblast+hmm High 75.4%798.5
DRSE_g22015.t1
Drepanocaryum sewerzowiiPhenylpropanoid · LACblast+hmm High 74.9%798.3
KAL8524274.1
Phlomoides rotataPhenylpropanoid · LACblast+hmm High 74.8%798.1
TECA_c26553_g1_i2_len_2029
Teucrium canadensePhenylpropanoid · LACblast+hmm High 75.7%798.1
evm.model.Chr11.1834
Callicarpa nudifloraPhenylpropanoid · LACblast+hmm High 68.0%797.8
386068.g89.t1
Ocimum basilicumPhenylpropanoid · LACblast+hmm High 72.6%797.7
DRSE_g3208.t1
Drepanocaryum sewerzowiiPhenylpropanoid · LACblast+hmm High 74.6%797.7
MACO_g15936.t1
Marmoritis complanataPhenylpropanoid · LACblast+hmm High 75.6%797.7
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_13.1084.mRNA1
Stenogyne calaminthoidesPhenylpropanoid · LACblast+hmm High 75.9%797.6
origanum_vulgare_123732.g2.t1
Origanum vulgarePhenylpropanoid · LACblast+hmm High 75.2%797.5
LAAL_c29346_g1_i1_len_2143
Lamium albumPhenylpropanoid · LACblast+hmm High 75.6%797.4