LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

LAC

LAC enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmePhenylpropanoid biosynthesis
Public candidate IDs
4,000
Species with candidates
80
Species with assignments
80
Source assignments
10,870
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers4,000 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
10,870
Public candidate count
4,000
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Ocimum basilicumNepetoideae · Ocimum Stable locus 43050 Available
Pogostemon cablinLamioideae · Pogostemon Stable locus 42750 Available
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 41150 No matrix
Nepeta catariaNepetoideae · Nepeta Stable locus 31550 Available
Salvia splendensNepetoideae · Salvia Stable locus 25750 No matrix
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 24950 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 23950 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 22550 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 21150 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 19750 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 19250 Available
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 18950 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 17050 Available
Origanum vulgareNepetoideae · Origanum Stable locus 17050 No matrix
Perilla frutescensNepetoideae · Perilla Stable locus 16350 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 16350 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 16050 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 15150 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 15050 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 14950 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 14850 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 14550 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 14350 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 14350 Available
Cornutia pyramidataPremnoideae · Cornutia Stable locus 14250 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 13950 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 13950 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 13450 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 13450 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 13350 No matrix
Isodon serraNepetoideae · Isodon Stable locus 13150 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 12950 Available
Marmoritis complanataNepetoideae · Marmoritis Stable locus 12650 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 12350 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 12050 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 11750 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 11650 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 11350 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 11250 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 11150 Available
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 11050 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 10950 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 10650 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 10450 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 10350 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 10250 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 10150 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 10150 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 9950 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 9850 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 9850 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 9650 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 9650 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 9550 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 9550 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 9450 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 9450 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 9350 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 9350 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 9350 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 9150 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 9150 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 8950 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 8850 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 8850 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 8750 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 8750 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 8650 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 8550 No matrix
Lamium albumLamioideae · Lamium Stable locus 8550 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 8450 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 8450 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 8450 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 8450 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 8350 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 8250 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 8250 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 7950 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 7850 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 5750 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
MESP_c43207_g1_i1_len_2168
Mentha spicataPhenylpropanoid · LACblast+hmm High 77.1%797.4
8:ILLG9G263.83m1
Isodon lophanthoidesPhenylpropanoid · LACblast+hmm High 76.4%797.3
Clgra_005250-T1
Clinopodium gracilePhenylpropanoid · LACblast+hmm High 74.3%797.3
evm.model.ptg000008l.703
Isodon serraPhenylpropanoid · LACblast+hmm High 76.4%797.3
Pat_B09G053100.m1
Pogostemon cablinPhenylpropanoid · LACblast+hmm High 75.0%797.2
g16495.t1
Nepeta mussiniiPhenylpropanoid · LACblast+hmm High 75.4%797.2
Ms_c003g01322.1
Mosla soochowensisPhenylpropanoid · LACblast+hmm High 76.2%797.1
ORMA_c49483_g1_i1_len_1975
Origanum majoranaPhenylpropanoid · LACblast+hmm High 73.9%797.1
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_25.1153.mRNA1
Stenogyne calaminthoidesPhenylpropanoid · LACblast+hmm High 74.0%797.1
506.g114.t1
Ocimum basilicumPhenylpropanoid · LACblast+hmm High 77.6%796.7
Sbai9C250T27.1
Scutellaria baicalensisPhenylpropanoid · LACblast+hmm High 77.9%796.7
AGFO_c26628_g1_i1_len_2252
Agastache foeniculumPhenylpropanoid · LACblast+hmm High 74.4%796.6
MAVU_c59839_g1_i1_len_1980
Marrubium vulgarePhenylpropanoid · LACblast+hmm High 75.9%796.6
Pat_A09G060600.m1
Pogostemon cablinPhenylpropanoid · LACblast+hmm High 74.8%796.5
XP_042026415.1
Salvia splendensPhenylpropanoid · LACblast+hmm High 74.4%796.5
tectona_grandis_Tg02g12460.t1
Tectona grandisPhenylpropanoid · LACblast+hmm High 75.0%796.5
1359.g39.t1
Ocimum basilicumPhenylpropanoid · LACblast+hmm High 74.5%796.3
AG34_scaffold6_05790T
Agastache rugosaPhenylpropanoid · LACblast+hmm High 74.4%796.0
Sbow02G0029220.1
Salvia bowleyanaPhenylpropanoid · LACblast+hmm High 77.8%796.0
Pat_A21G138700.m1
Pogostemon cablinPhenylpropanoid · LACblast+hmm High 75.9%795.8
Pat_A21G138700.m2
Pogostemon cablinPhenylpropanoid · LACblast+hmm High 75.9%795.8
Sch000016113
Schizonepeta tenuifoliaPhenylpropanoid · LACblast+hmm High 74.8%795.8
VIAG_c30283_g1_i1_len_1861
Vitex agnus-castusPhenylpropanoid · LACblast+hmm High 74.5%795.6
Pat_B21G126100.m1
Pogostemon cablinPhenylpropanoid · LACblast+hmm High 75.8%795.5
Pat_B21G126100.m2
Pogostemon cablinPhenylpropanoid · LACblast+hmm High 75.8%795.5
MODI_c35110_g1_i2_len_2002
Monarda didymaPhenylpropanoid · LACblast+hmm High 72.8%795.4
ORMA_c32816_g1_i1_len_1898
Origanum majoranaPhenylpropanoid · LACblast+hmm High 74.9%795.3
STOF_c55471_g1_i1_len_2170
Stachys officinalisPhenylpropanoid · LACblast+hmm High 75.0%795.2
MEOF_c11675_g1_i1_len_2011
Melissa officinalisPhenylpropanoid · LACblast+hmm High 75.0%795.1
PEAT_c37708_g1_i1_len_1982
Perovskia atriplicifoliaPhenylpropanoid · LACblast+hmm High 75.0%795.0
LAAN_c54306_g2_i5_len_2083
Lavandula angustifoliaPhenylpropanoid · LACblast+hmm High 75.3%794.8
Pat_A10G050200.m1
Pogostemon cablinPhenylpropanoid · LACblast+hmm High 75.2%794.8
MEPI_c61531_g1_i1_len_1982
Mentha x piperitaPhenylpropanoid · LACblast+hmm High 73.4%794.4
Sbow01G0087480.1
Salvia bowleyanaPhenylpropanoid · LACblast+hmm High 77.7%794.3
973.g64.t1
Ocimum basilicumPhenylpropanoid · LACblast+hmm High 75.0%794.1
LAAN_c37241_g1_i1_len_1965
Lavandula angustifoliaPhenylpropanoid · LACblast+hmm High 73.4%794.0
BAPS_c40314_g1_i3_len_1804
Ballota pseudodictamnusPhenylpropanoid · LACblast+hmm High 78.1%793.9
CAame08G0040490.v1.94
Callicarpa americanaPhenylpropanoid · LACblast+hmm High 68.2%793.6
XP_042031267.1
Salvia splendensPhenylpropanoid · LACblast+hmm High 74.0%793.6
GWHPBJVA026156
Thymus quinquecostatusPhenylpropanoid · LACblast+hmm High 74.7%793.2
GlLon_010318-T1
Glechoma longitubaPhenylpropanoid · LACblast+hmm High 68.0%793.2
Es3B.G117400.t1
Elsholtzia splendensPhenylpropanoid · LACblast+hmm High 76.5%793.1
Roff15360200220
Salvia rosmarinusPhenylpropanoid · LACblast+hmm High 76.1%793.1
BAPS_c29032_g1_i1_len_1936
Ballota pseudodictamnusPhenylpropanoid · LACblast+hmm High 73.3%793.0
evm.model.chr10.1646
Prunella vulgarisPhenylpropanoid · LACblast+hmm High 75.3%792.6
Es3A.G117600.t1
Elsholtzia splendensPhenylpropanoid · LACblast+hmm High 76.5%792.5
Roff8210501320
Salvia rosmarinusPhenylpropanoid · LACblast+hmm High 74.4%792.5
MESP_c44717_g1_i2_len_2042
Mentha spicataPhenylpropanoid · LACblast+hmm High 76.2%792.4
scutellaria_barbata_GWHPAOTP027605
Scutellaria barbataPhenylpropanoid · LACblast+hmm High 77.6%792.2
Pat_B22G129700.m1
Pogostemon cablinPhenylpropanoid · LACblast+hmm High 77.3%792.0