LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

CPI1

CPI1 enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmeSteroid and sterol biosynthesis
Public candidate IDs
121
Species with candidates
74
Species with assignments
74
Source assignments
121
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers121 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
121
Public candidate count
121
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Nepeta mussiniiNepetoideae · Nepeta Stable locus 66 Available
Pogostemon cablinLamioideae · Pogostemon Stable locus 66 Available
Phlomoides rotataLamioideae · Phlomoides Stable locus 55 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 44 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 33 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 33 No matrix
Nepeta catariaNepetoideae · Nepeta Stable locus 33 Available
Salvia hispanicaNepetoideae · Salvia Stable locus 33 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 33 Available
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 33 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 33 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 22 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 22 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 22 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 22 No matrix
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 22 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 22 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 22 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 22 No matrix
Isodon serraNepetoideae · Isodon Stable locus 22 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 22 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 22 No matrix
Ocimum basilicumNepetoideae · Ocimum Stable locus 22 Available
Origanum vulgareNepetoideae · Origanum Stable locus 22 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 22 Available
Salvia splendensNepetoideae · Salvia Stable locus 22 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 22 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 11 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 11 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 11 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 11 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 11 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 11 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 11 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 11 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 11 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 11 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 11 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 11 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 11 No matrix
Lamium albumLamioideae · Lamium Stable locus 11 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 11 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 11 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 11 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 11 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 11 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 11 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 11 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 11 Available
Mentha spicataNepetoideae · Mentha Stable locus 11 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 11 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 11 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 11 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 11 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 11 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 11 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 11 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 11 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 11 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 11 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 11 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 11 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 11 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 11 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 11 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 11 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 11 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 11 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 11 Available
Teucrium canadenseAjugoideae · Teucrium Stable locus 11 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 11 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 11 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 11 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 11 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
SAOF_c34290_g1_i8_len_2151
Salvia officinalisSteroid / sterol · CPI1blast+hmm High 82.2%127.0
STOF_c59478_g6_i3_len_1355
Stachys officinalisSteroid / sterol · CPI1blast+hmm High 78.3%127.0
WEFR_c39771_g1_i2_len_2048
Westringia fruticosaSteroid / sterol · CPI1blast+hmm High 79.7%127.0
g14967.t1
Salvia sclareaSteroid / sterol · CPI1blast+hmm High 81.0%127.0
g30630.t1
Hyssopus officinalisSteroid / sterol · CPI1blast+hmm High 80.7%127.0
Dru_6G0011200.1
Dracocephalum rupestreSteroid / sterol · CPI1blast+hmm High 80.7%126.9
KAL8473308.1
Phlomoides rotataSteroid / sterol · CPI1blast+hmm High 79.4%126.9
MEPI_c57747_g1_i3_len_1406
Mentha x piperitaSteroid / sterol · CPI1blast+hmm High 81.0%126.8
Teum.07G025130.1
Teucrium marumSteroid / sterol · CPI1blast+hmm High 77.6%126.8
GWHPBJVA025823
Thymus quinquecostatusSteroid / sterol · CPI1blast+hmm High 81.4%126.7
LYAM_c20472_g1_i1_len_2394
Lycopus americanusSteroid / sterol · CPI1blast+hmm High 80.4%126.7
Teum.07G025130.2
Teucrium marumSteroid / sterol · CPI1blast+hmm High 81.6%126.7
Teucrium_chamaedrys__Tcha153740
Teucrium chamaedrysSteroid / sterol · CPI1blast+hmm High 81.9%126.6
g6256.t1.1.5b2c7c7a
Nepeta mussiniiSteroid / sterol · CPI1blast+hmm High 80.7%126.6
origanum_vulgare_651.g9.t1
Origanum vulgareSteroid / sterol · CPI1blast+hmm High 69.0%126.6
LAAL_c17566_g1_i1_len_1425
Lamium albumSteroid / sterol · CPI1blast+hmm High 79.8%126.5
g6256.t1
Nepeta mussiniiSteroid / sterol · CPI1blast+hmm High 78.9%126.5
LELE_c25918_g1_i2_len_1474
Leonotis leonurusSteroid / sterol · CPI1blast+hmm High 79.8%126.3
Pat_A09G029900.m2
Pogostemon cablinSteroid / sterol · CPI1blast+hmm High 71.6%126.3
Teucrium_chamaedrys__Tcha63112
Teucrium chamaedrysSteroid / sterol · CPI1blast+hmm High 81.9%126.3
22:ILLG12G47.68m1
Isodon lophanthoidesSteroid / sterol · CPI1blast+hmm High 63.0%126.2
Mlonscaffold_4_length_442849540103330.1.v1.326
Mentha longifoliaSteroid / sterol · CPI1blast+hmm High 81.0%126.2
VIAG_c43206_g1_i2_len_1263
Vitex agnus-castusSteroid / sterol · CPI1blast+hmm High 80.1%126.2
ORMA_c52928_g1_i10_len_1347
Origanum majoranaSteroid / sterol · CPI1blast+hmm High 81.4%126.1
Pat_A16G160700.m2
Pogostemon cablinSteroid / sterol · CPI1blast+hmm High 72.0%126.1
THVU_c45336_g1_i1_len_1501
Thymus vulgarisSteroid / sterol · CPI1blast+hmm High 81.4%126.1
COTO_c29221_g1_i3_len_2116
Congea tomentosaSteroid / sterol · CPI1blast+hmm High 79.9%126.0
Clgra_034279-T1
Clinopodium gracileSteroid / sterol · CPI1blast+hmm High 80.3%126.0
MESP_c37638_g1_i1_len_1265
Mentha spicataSteroid / sterol · CPI1blast+hmm High 80.7%126.0
Pat_A09G029900.m1
Pogostemon cablinSteroid / sterol · CPI1blast+hmm High 80.0%126.0
Pat_B09G028100.m1
Pogostemon cablinSteroid / sterol · CPI1blast+hmm High 80.0%126.0
Teucrium_chamaedrys__Tcha93883
Teucrium chamaedrysSteroid / sterol · CPI1blast+hmm High 82.3%126.0
evm.model.LG04.703
Clinopodium barosmumSteroid / sterol · CPI1blast+hmm High 81.2%126.0
AG34_scaffold8_04700T
Agastache rugosaSteroid / sterol · CPI1blast+hmm High 80.3%125.9
AGFO_c26972_g1_i3_len_1367
Agastache foeniculumSteroid / sterol · CPI1blast+hmm High 80.3%125.9
Sbai3A240T138.1
Scutellaria baicalensisSteroid / sterol · CPI1blast+hmm High 73.9%125.9
Pat_A16G160700.m1
Pogostemon cablinSteroid / sterol · CPI1blast+hmm High 79.3%125.8
Pat_B16G147000.m1
Pogostemon cablinSteroid / sterol · CPI1blast+hmm High 78.5%125.7
g5757.t1.1.5b2c7c7a
Nepeta mussiniiSteroid / sterol · CPI1blast+hmm High 81.0%125.7
HYSU_c32507_g1_i2_len_1935
Hyptis suaveolensSteroid / sterol · CPI1blast+hmm High 77.8%125.6
evm.model.ptg000017l.605
Isodon serraSteroid / sterol · CPI1blast+hmm High 79.7%125.6
Mc3g19940.1
Mosla chinensisSteroid / sterol · CPI1blast+hmm High 81.9%125.4
PEBA_c47077_g1_i1_len_1189
Petraeovitex bambusetoriumSteroid / sterol · CPI1blast+hmm High 80.4%125.4
Smil07G0014610.1.v1.484
Salvia miltiorrhizaSteroid / sterol · CPI1blast+hmm High 80.0%125.4
g47921.t1
Nepeta catariaSteroid / sterol · CPI1blast+hmm High 80.7%125.4
g35637.t1
Nepeta catariaSteroid / sterol · CPI1blast+hmm High 80.3%125.3
Sbow05G0019080.1
Salvia bowleyanaSteroid / sterol · CPI1blast+hmm High 79.1%125.1
Smil03G0020990.1.v1.484
Salvia miltiorrhizaSteroid / sterol · CPI1blast+hmm High 80.5%125.1
g5757.t1.2.5b2c7c7a
Nepeta mussiniiSteroid / sterol · CPI1blast+hmm High 74.1%125.1
372524.g5.t1
Ocimum basilicumSteroid / sterol · CPI1blast+hmm High 79.7%124.9