LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

CPI1

CPI1 enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmeSteroid and sterol biosynthesis
Public candidate IDs
121
Species with candidates
74
Species with assignments
74
Source assignments
121
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers121 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
121
Public candidate count
121
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Nepeta mussiniiNepetoideae · Nepeta Stable locus 66 Available
Pogostemon cablinLamioideae · Pogostemon Stable locus 66 Available
Phlomoides rotataLamioideae · Phlomoides Stable locus 55 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 44 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 33 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 33 No matrix
Nepeta catariaNepetoideae · Nepeta Stable locus 33 Available
Salvia hispanicaNepetoideae · Salvia Stable locus 33 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 33 Available
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 33 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 33 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 22 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 22 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 22 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 22 No matrix
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 22 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 22 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 22 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 22 No matrix
Isodon serraNepetoideae · Isodon Stable locus 22 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 22 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 22 No matrix
Ocimum basilicumNepetoideae · Ocimum Stable locus 22 Available
Origanum vulgareNepetoideae · Origanum Stable locus 22 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 22 Available
Salvia splendensNepetoideae · Salvia Stable locus 22 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 22 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 11 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 11 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 11 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 11 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 11 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 11 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 11 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 11 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 11 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 11 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 11 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 11 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 11 No matrix
Lamium albumLamioideae · Lamium Stable locus 11 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 11 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 11 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 11 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 11 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 11 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 11 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 11 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 11 Available
Mentha spicataNepetoideae · Mentha Stable locus 11 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 11 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 11 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 11 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 11 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 11 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 11 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 11 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 11 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 11 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 11 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 11 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 11 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 11 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 11 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 11 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 11 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 11 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 11 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 11 Available
Teucrium canadenseAjugoideae · Teucrium Stable locus 11 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 11 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 11 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 11 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 11 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
372524.g5.t1.1.5db1524f
Ocimum basilicumSteroid / sterol · CPI1blast+hmm High 79.7%124.9
g5757.t1
Nepeta mussiniiSteroid / sterol · CPI1blast+hmm High 81.8%124.9
MODI_c40276_g1_i3_len_1178
Monarda didymaSteroid / sterol · CPI1blast+hmm High 80.5%124.8
LAAN_c53279_g1_i3_len_1402
Lavandula angustifoliaSteroid / sterol · CPI1blast+hmm High 79.7%124.6
Lj7g28270.1
Leonurus japonicusSteroid / sterol · CPI1blast+hmm High 79.4%124.4
Ls5g14530.1
Leonurus sibiricusSteroid / sterol · CPI1blast+hmm High 79.4%121.5
origanum_vulgare_997.g2.t1
Origanum vulgareSteroid / sterol · CPI1blast+hmm High 78.4%119.6
ocimum_sanctum_Ote100230630011
Ocimum tenuiflorumSteroid / sterol · CPI1blast+hmm High 72.2%113.2
LAAN_c43003_g2_i1_len_398
Lavandula angustifoliaSteroid / sterol · CPI1blast+hmm High 80.3%90.8
DRSE_g4492.t1
Drepanocaryum sewerzowiiSteroid / sterol · CPI1blast+hmm High 81.2%74.2
Mc7g15370.1
Mosla chinensisSteroid / sterol · CPI1blast+hmm High 62.0%69.5
CAame01G0046160.v1.94
Callicarpa americanaSteroid / sterol · CPI1blast+hmm High 81.4%56.8
Teum.07G025130.3
Teucrium marumSteroid / sterol · CPI1blast+hmm High 82.4%56.8
g6256.t1.2.5b2c7c7a
Nepeta mussiniiSteroid / sterol · CPI1blast+hmm High 82.1%55.9
COTO_c29221_g2_i1_len_1227
Congea tomentosaSteroid / sterol · CPI1blast+hmm High 75.9%55.7
KAL8536240.1
Phlomoides rotataSteroid / sterol · CPI1blast+hmm High 70.7%54.2
AG34_scaffold4_14930T
Agastache rugosaSteroid / sterol · CPI1blast+hmm High 66.4%44.6
22:ILLG12G156.86m1
Isodon lophanthoidesSteroid / sterol · CPI1blast+hmm Medium 59.1%125.5
g11980.t1
Nepeta catariaSteroid / sterol · CPI1blast+hmm Medium 62.5%100.3
HOSA_c46626_g2_i1_len_1124
Holmskioldia sanguineaSteroid / sterol · CPI1blast Medium 86.4%—
GLHE_c47057_g1_i1_len_356
Glechoma hederaceaSteroid / sterol · CPI1hmm Medium —17.0