LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

FK

FK enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmeSteroid and sterol biosynthesis
Public candidate IDs
703
Species with candidates
80
Species with assignments
80
Source assignments
703
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers703 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
703
Public candidate count
703
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 4040 No matrix
Pogostemon cablinLamioideae · Pogostemon Stable locus 3535 Available
Nepeta catariaNepetoideae · Nepeta Stable locus 2424 Available
Teucrium marumAjugoideae · Teucrium Stable locus 2323 No matrix
Ocimum basilicumNepetoideae · Ocimum Stable locus 2121 Available
Phlomoides rotataLamioideae · Phlomoides Stable locus 2121 No matrix
Salvia splendensNepetoideae · Salvia Stable locus 2020 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 1818 Available
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 1616 No matrix
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 1515 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 1515 No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 1212 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 1111 No matrix
Perilla frutescensNepetoideae · Perilla Stable locus 1111 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 1111 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 1111 Available
Mentha longifoliaNepetoideae · Mentha Stable locus 1010 Available
Origanum vulgareNepetoideae · Origanum Stable locus 1010 No matrix
Isodon serraNepetoideae · Isodon Stable locus 99 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 99 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 99 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 99 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 88 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 88 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 88 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 88 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 88 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 88 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 88 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 88 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 88 Available
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 88 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 88 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 77 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 77 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 77 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 77 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 77 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 77 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 77 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 77 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 77 Available
Teucrium canadenseAjugoideae · Teucrium Stable locus 77 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 66 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 66 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 66 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 66 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 66 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 66 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 66 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 66 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 66 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 66 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 66 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 66 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 55 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 55 No matrix
Lamium albumLamioideae · Lamium Stable locus 55 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 55 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 55 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 55 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 55 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 55 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 55 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 55 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 55 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 55 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 55 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 55 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 55 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 55 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 55 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 44 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 44 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 44 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 44 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 44 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 44 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 33 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 11 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
COPY_c45321_g1_i1_len_271
Cornutia pyramidataSteroid / sterol · FKblast Medium 61.4%—
COPY_c79624_g4_i1_len_373
Cornutia pyramidataSteroid / sterol · FKblast Medium 45.1%—
COPY_c79624_g5_i1_len_2755
Cornutia pyramidataSteroid / sterol · FKblast Medium 65.0%—
COTO_c43514_g1_i2_len_2873
Congea tomentosaSteroid / sterol · FKblast Medium 69.4%—
Clgra_014740-T1
Clinopodium gracileSteroid / sterol · FKblast Medium 61.6%—
DRSE_g1604.t1
Drepanocaryum sewerzowiiSteroid / sterol · FKblast Medium 61.2%—
Dru_2G0016060.1
Dracocephalum rupestreSteroid / sterol · FKblast Medium 71.8%—
Es3A.G247100.t1
Elsholtzia splendensSteroid / sterol · FKblast Medium 69.0%—
Es3B.G245200.t1
Elsholtzia splendensSteroid / sterol · FKblast Medium 69.0%—
GLHE_c63751_g1_i1_len_1979
Glechoma hederaceaSteroid / sterol · FKblast Medium 71.0%—
GMPH_c28427_g2_i2_len_2428
Gmelina philippensisSteroid / sterol · FKblast Medium 67.8%—
GWHPBJVA006820
Thymus quinquecostatusSteroid / sterol · FKblast Medium 59.6%—
HOSA_c49295_g3_i1_len_2874
Holmskioldia sanguineaSteroid / sterol · FKblast Medium 73.5%—
HYSU_c16302_g1_i2_len_2986
Hyptis suaveolensSteroid / sterol · FKblast Medium 75.1%—
KAL1557648.1
Salvia divinorumSteroid / sterol · FKblast Medium 70.5%—
KAL8473070.1
Phlomoides rotataSteroid / sterol · FKblast Medium 76.7%—
KAL8473071.1
Phlomoides rotataSteroid / sterol · FKblast Medium 47.1%—
KAL8487912.1
Phlomoides rotataSteroid / sterol · FKblast Medium 41.7%—
KAL8501230.1
Phlomoides rotataSteroid / sterol · FKblast Medium 62.9%—
KAL8501231.1
Phlomoides rotataSteroid / sterol · FKblast Medium 62.8%—
KAL8533283.1
Phlomoides rotataSteroid / sterol · FKblast Medium 33.5%—
LAAL_c46241_g1_i1_len_2797
Lamium albumSteroid / sterol · FKblast Medium 63.0%—
LAAN_c57579_g1_i1_len_2111
Lavandula angustifoliaSteroid / sterol · FKblast Medium 68.8%—
LECA_c22933_g1_i1_len_2883
Leonurus cardiacaSteroid / sterol · FKblast Medium 56.9%—
LELE_c20185_g1_i1_len_2905
Leonotis leonurusSteroid / sterol · FKblast Medium 70.7%—
LYAM_c7096_g1_i1_len_2770
Lycopus americanusSteroid / sterol · FKblast Medium 61.6%—
Lj10g07820.1
Leonurus japonicusSteroid / sterol · FKblast Medium 57.2%—
Ls7g07860.1
Leonurus sibiricusSteroid / sterol · FKblast Medium 59.7%—
MACO_g4531.t1
Marmoritis complanataSteroid / sterol · FKblast Medium 61.4%—
MAVU_c27895_g1_i2_len_864
Marrubium vulgareSteroid / sterol · FKblast Medium 32.5%—
MAVU_c31440_g1_i1_len_441
Marrubium vulgareSteroid / sterol · FKblast Medium 32.8%—
MAVU_c5625_g1_i1_len_2838
Marrubium vulgareSteroid / sterol · FKblast Medium 60.8%—
MAVU_c79657_g1_i1_len_338
Marrubium vulgareSteroid / sterol · FKblast Medium 36.0%—
MEOF_c17215_g1_i1_len_3534
Melissa officinalisSteroid / sterol · FKblast Medium 62.9%—
MEPI_c63632_g1_i2_len_2767
Mentha x piperitaSteroid / sterol · FKblast Medium 60.3%—
MESP_c41978_g1_i2_len_2798
Mentha spicataSteroid / sterol · FKblast Medium 71.1%—
MODI_c44311_g1_i1_len_2761
Monarda didymaSteroid / sterol · FKblast Medium 62.0%—
Mc1g34260.1
Mosla chinensisSteroid / sterol · FKblast Medium 61.9%—
Mlonscaffold_6_length_375374740147230.1.v1.326
Mentha longifoliaSteroid / sterol · FKblast Medium 61.1%—
Ms_c007g02810.1
Mosla soochowensisSteroid / sterol · FKblast Medium 61.6%—
ORMA_c42807_g1_i2_len_3120
Origanum majoranaSteroid / sterol · FKblast Medium 54.6%—
PEAT_c42045_g1_i1_len_2737
Perovskia atriplicifoliaSteroid / sterol · FKblast Medium 62.5%—
PEBA_c45368_g1_i3_len_2975
Petraeovitex bambusetoriumSteroid / sterol · FKblast Medium 72.8%—
PHFR_c74882_g4_i1_len_2857
Phlomis fruticosaSteroid / sterol · FKblast Medium 62.2%—
PLBA_c20699_g1_i2_len_2751
Plectranthus barbatusSteroid / sterol · FKblast Medium 62.9%—
PRLA_c70629_g2_i2_len_2761
Prostanthera lasianthosSteroid / sterol · FKblast Medium 57.3%—
PRMI_c37890_g1_i1_len_3099
Premna microphyllaSteroid / sterol · FKblast Medium 66.7%—
Pat_A06G192700.m1
Pogostemon cablinSteroid / sterol · FKblast Medium 32.3%—
Pat_A07G085900.m1
Pogostemon cablinSteroid / sterol · FKblast Medium 64.8%—
Pat_A08G086900.m1
Pogostemon cablinSteroid / sterol · FKblast Medium 64.6%—