LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 gene sequences

Coordinate-aware organelle record

Ballota nigra mitochondrial genome

Available OX344733.1;OX344732.1;OX344731.1 395,588 bp 65 gene candidates
DNA resources Accession record
Ballota nigra mitochondrial Biopython GenomeDiagram 1.79; GenBank local location segments. trne-ttc · OX344733.1 · 5,886–5,957 bp · − trne-uuc · OX344733.1 · 5,886–5,957 bp · − cox1 · OX344733.1 · 22,368–23,366 bp · − cox1 · OX344733.1 · 24,189–24,905 bp · − atp1 · OX344733.1 · 27,822–29,345 bp · − rpl10 · OX344733.1 · 54,830–55,315 bp · − nad1 · OX344733.1 · 58,297–58,488 bp · − nad1 · OX344733.1 · 59,724–59,813 bp · − rps13 · OX344733.1 · 60,782–61,135 bp · − trnfm-cau · OX344733.1 · 76,561–76,633 bp · − atp9 · OX344733.1 · 81,702–81,824 bp · − trnq-ttg · OX344733.1 · 90,201–90,272 bp · − trnq-uug · OX344733.1 · 90,201–90,272 bp · − ccmFc · OX344733.1 · 122,282–122,812 bp · − ccmFc · OX344733.1 · 123,759–124,379 bp · − nad4 · OX344732.1 · 72,384–72,470 bp · − nad4 · OX344732.1 · 75,313–75,732 bp · − nad4 · OX344732.1 · 78,367–78,879 bp · − nad4 · OX344732.1 · 80,287–80,736 bp · − trnp-tgg · OX344732.1 · 100,328–100,402 bp · − trnp-ugg · OX344732.1 · 100,328–100,402 bp · − trnf-gaa · OX344732.1 · 100,655–100,723 bp · − trnl-uaa · OX344732.1 · 100,655–100,723 bp · − trns-gct · OX344732.1 · 101,091–101,181 bp · − trns-gcu · OX344732.1 · 101,093–101,180 bp · − ccmFn · OX344732.1 · 112,873–114,597 bp · − cob · OX344731.1 · 5,782–6,948 bp · − cox2 · OX344731.1 · 20,745–20,828 bp · − cox2 · OX344731.1 · 25,928–26,626 bp · − rrn26-1 · OX344731.1 · 30,894–34,286 bp · − rrn26-2 · OX344731.1 · 30,894–34,286 bp · − rrn26 · OX344731.1 · 30,900–34,284 bp · − nad6 · OX344733.1 · 11,314–11,928 bp · + nad4L · OX344733.1 · 17,197–17,496 bp · + atp4 · OX344733.1 · 17,673–18,266 bp · + rps4 · OX344733.1 · 38,868–39,920 bp · + rps3 · OX344733.1 · 40,405–40,479 bp · + rps3 · OX344733.1 · 42,192–43,808 bp · + rpl16 · OX344733.1 · 43,738–44,211 bp · + ccmB · OX344733.1 · 48,218–48,835 bp · + rps10 · OX344733.1 · 67,429–67,623 bp · + rps10 · OX344733.1 · 68,424–68,522 bp · + nad5 · OX344733.1 · 100,907–101,143 bp · + nad5 · OX344733.1 · 101,995–103,212 bp · + atp8 · OX344733.1 · 107,536–108,057 bp · + cox3 · OX344733.1 · 108,600–109,394 bp · + sdh4 · OX344733.1 · 109,325–109,510 bp · + ccmC · OX344733.1 · 120,556–121,155 bp · + trnl-caa · OX344733.1 · 121,207–121,280 bp · + trni-caa · OX344733.1 · 121,207–121,280 bp · + rpl2 · OX344733.1 · 121,689–121,964 bp · + trny-gua · OX344732.1 · 1–82 bp · + trny-gta · OX344732.1 · 1–83 bp · + nad2 · OX344732.1 · 612–767 bp · + nad2 · OX344732.1 · 2,200–2,838 bp · + nad2 · OX344732.1 · 4,241–4,426 bp · + trnfm-cat-1 · OX344732.1 · 13,057–13,126 bp · + trnfm-cat-2 · OX344732.1 · 13,057–13,126 bp · + nad3 · OX344732.1 · 47,023–47,376 bp · + rps12 · OX344732.1 · 47,428–47,802 bp · + nad9 · OX344732.1 · 59,616–60,185 bp · + trnw-cca · OX344732.1 · 60,826–60,899 bp · + mttB · OX344732.1 · 64,654–65,493 bp · + matR · OX344732.1 · 66,829–68,724 bp · + trnd-gtc · OX344732.1 · 83,460–83,536 bp · + trnd-guc · OX344732.1 · 83,461–83,534 bp · + nad7 · OX344731.1 · 37,666–37,830 bp · + nad7 · OX344731.1 · 38,670–38,777 bp · + nad7 · OX344731.1 · 40,107–40,817 bp · + nad7 · OX344731.1 · 42,077–42,421 bp · + trnfm-cat · OX344731.1 · 86,127–86,198 bp · + trnm · OX344731.1 · 86,127–86,198 bp · + atp6 · OX344731.1 · 113,771–114,439 bp · + rrn18 · OX344731.1 · 125,701–127,389 bp · + trnm-cat · OX344731.1 · 139,846–139,922 bp · + trnm-cau · OX344731.1 · 139,846–139,922 bp · + trni-cau · OX344731.1 · 139,846–139,922 bp · + trni-cat-1 · OX344731.1 · 139,846–139,927 bp · + trni-cat-2 · OX344731.1 · 139,846–139,927 bp · + trni-cat · OX344731.1 · 139,846–139,928 bp · + 0 kb 33 kb 66 kb 99 kb 132 kb 165 kb 198 kb 231 kb 264 kb 297 kb 330 kb 363 kb Ballota nigra ASSEMBLY COMPONENTS 3 components 395,588 bp · 65 gene candidates Gene function Transfer RNA NADH dehydrogenase ATP synthase Cytochrome Ribosomal protein Other Ribosomal RNA

Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. This record includes 65 homology-derived gene candidates. Candidate tracks show CDS/RNA intervals from the local annotation and its original homology evidence table; recorded discontinuous parts are drawn separately. These candidates are not original NCBI gene annotations. Hover for coordinates; click a segment to open its gene page. Assembly components are concatenated in accession order for a coordinate overview; this does not establish physical connections. A circular layout does not establish a physical master-circle configuration. Biopython GenomeDiagram.

Gene-position browser

Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.

80 local segments
GeneTypeGroupAccessionStrandStartEndLength
trne-ttctRNA candidatetranslation-rnaOX344733.1−5886595772
trne-uuctRNA candidatetranslation-rnaOX344733.1−5886595772
nad6CDS candidatenad-dehydrogenaseOX344733.1+1131411928615
nad4LCDS candidatenad-dehydrogenaseOX344733.1+1719717496300
atp4CDS candidateatp-synthaseOX344733.1+1767318266594
cox1CDS candidatecytochromeOX344733.1−2236823366999
cox1CDS candidatecytochromeOX344733.1−2418924905717
atp1CDS candidateatp-synthaseOX344733.1−27822293451524
rps4CDS candidateribosomal-proteinOX344733.1+38868399201053
rps3CDS candidateribosomal-proteinOX344733.1+404054047975
rps3CDS candidateribosomal-proteinOX344733.1+42192438081617
rpl16CDS candidateribosomal-proteinOX344733.1+4373844211474
ccmBCDS candidatecytochromeOX344733.1+4821848835618
rpl10CDS candidateribosomal-proteinOX344733.1−5483055315486
nad1CDS candidatenad-dehydrogenaseOX344733.1−5829758488192
nad1CDS candidatenad-dehydrogenaseOX344733.1−597245981390
rps13CDS candidateribosomal-proteinOX344733.1−6078261135354
rps10CDS candidateribosomal-proteinOX344733.1+6742967623195
rps10CDS candidateribosomal-proteinOX344733.1+684246852299
trnfm-cautRNA candidatetranslation-rnaOX344733.1−765617663373
atp9CDS candidateatp-synthaseOX344733.1−8170281824123
trnq-ttgtRNA candidatetranslation-rnaOX344733.1−902019027272
trnq-uugtRNA candidatetranslation-rnaOX344733.1−902019027272
nad5CDS candidatenad-dehydrogenaseOX344733.1+100907101143237
nad5CDS candidatenad-dehydrogenaseOX344733.1+1019951032121218
atp8CDS candidateatp-synthaseOX344733.1+107536108057522
cox3CDS candidatecytochromeOX344733.1+108600109394795
sdh4CDS candidateotherOX344733.1+109325109510186
ccmCCDS candidatecytochromeOX344733.1+120556121155600
trni-caatRNA candidatetranslation-rnaOX344733.1+12120712128074
trnl-caatRNA candidatetranslation-rnaOX344733.1+12120712128074
rpl2CDS candidateribosomal-proteinOX344733.1+121689121964276
ccmFcCDS candidatecytochromeOX344733.1−122282122812531
ccmFcCDS candidatecytochromeOX344733.1−123759124379621
trny-guatRNA candidatetranslation-rnaOX344732.1+18282
trny-gtatRNA candidatetranslation-rnaOX344732.1+18383
nad2CDS candidatenad-dehydrogenaseOX344732.1+612767156
nad2CDS candidatenad-dehydrogenaseOX344732.1+22002838639
nad2CDS candidatenad-dehydrogenaseOX344732.1+42414426186
trnfm-cat-1tRNA candidatetranslation-rnaOX344732.1+130571312670
trnfm-cat-2tRNA candidatetranslation-rnaOX344732.1+130571312670
nad3CDS candidatenad-dehydrogenaseOX344732.1+4702347376354
rps12CDS candidateribosomal-proteinOX344732.1+4742847802375
nad9CDS candidatenad-dehydrogenaseOX344732.1+5961660185570
trnw-ccatRNA candidatetranslation-rnaOX344732.1+608266089974
mttBCDS candidateotherOX344732.1+6465465493840
matRCDS candidateotherOX344732.1+66829687241896
nad4CDS candidatenad-dehydrogenaseOX344732.1−723847247087
nad4CDS candidatenad-dehydrogenaseOX344732.1−7531375732420
nad4CDS candidatenad-dehydrogenaseOX344732.1−7836778879513
nad4CDS candidatenad-dehydrogenaseOX344732.1−8028780736450
trnd-gtctRNA candidatetranslation-rnaOX344732.1+834608353677
trnd-guctRNA candidatetranslation-rnaOX344732.1+834618353474
trnp-tggtRNA candidatetranslation-rnaOX344732.1−10032810040275
trnp-uggtRNA candidatetranslation-rnaOX344732.1−10032810040275
trnf-gaatRNA candidatetranslation-rnaOX344732.1−10065510072369
trnl-uaatRNA candidatetranslation-rnaOX344732.1−10065510072369
trns-gcttRNA candidatetranslation-rnaOX344732.1−10109110118191
trns-gcutRNA candidatetranslation-rnaOX344732.1−10109310118088
ccmFnCDS candidatecytochromeOX344732.1−1128731145971725
cobCDS candidatecytochromeOX344731.1−578269481167
cox2CDS candidatecytochromeOX344731.1−207452082884
cox2CDS candidatecytochromeOX344731.1−2592826626699
rrn26-1rRNA candidateribosomal-rnaOX344731.1−30894342863393
rrn26-2rRNA candidateribosomal-rnaOX344731.1−30894342863393
rrn26rRNA candidateribosomal-rnaOX344731.1−30900342843385
nad7CDS candidatenad-dehydrogenaseOX344731.1+3766637830165
nad7CDS candidatenad-dehydrogenaseOX344731.1+3867038777108
nad7CDS candidatenad-dehydrogenaseOX344731.1+4010740817711
nad7CDS candidatenad-dehydrogenaseOX344731.1+4207742421345
trnfm-cattRNA candidatetranslation-rnaOX344731.1+861278619872
trnmtRNA candidatetranslation-rnaOX344731.1+861278619872
atp6CDS candidateatp-synthaseOX344731.1+113771114439669
rrn18rRNA candidateribosomal-rnaOX344731.1+1257011273891689
trni-cautRNA candidatetranslation-rnaOX344731.1+13984613992277
trnm-cattRNA candidatetranslation-rnaOX344731.1+13984613992277
trnm-cautRNA candidatetranslation-rnaOX344731.1+13984613992277
trni-cat-1tRNA candidatetranslation-rnaOX344731.1+13984613992782
trni-cat-2tRNA candidatetranslation-rnaOX344731.1+13984613992782
trni-cattRNA candidatetranslation-rnaOX344731.1+13984613992883

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources
Mitochondrial genomeOX344733.1Mitochondrial genomeOX344732.1Mitochondrial genomeOX344731.1DNA · rps12NC_066022