Species pathway expression context

Ocimum basilicum

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Ocimum_basilicum.gene_tpm_log1p.tsv
Samples
10
Matrix genes
65,635
Expressed genes
59,568
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
CandidateCardinal_flower-1Cardinal_flower-2Cardinal_flower-3Cardinal_leaf-1Cardinal_leaf-2Cardinal_leaf-3Sweet_basil_flowerSweet_basil_leafSweet_basil_rootSweet_basil_stem
1597.g26.t1Alkaloid · ODC
1670.g4.t1Alkaloid · ODC
1670.g7.t1Alkaloid · ODC
1819.g2.t1Alkaloid · ODC
1845.g43.t1Alkaloid · ODC
1879.g146.t1Alkaloid · ODC
1886.g151.t1Alkaloid · ODC
1949.g60.t1Alkaloid · ODC
363745.g2.t1Alkaloid · ODC
380391.g6.t1Alkaloid · ODC
382430.g25.t1Alkaloid · ODC
383635.g49.t1Alkaloid · ODC
383635.g49.t1.1.5db15345Alkaloid · ODC
383635.g49.t1.2.5db15345Alkaloid · ODC
383635.g49.t1.3.5db15345Alkaloid · ODC
384119.g178.t1Alkaloid · ODC
384449.g1.t1Alkaloid · ODC
384516.g1.t1Alkaloid · ODC
385620.g24.t1Alkaloid · ODC
385709.g71.t1Alkaloid · ODC
386050.g98.t1Alkaloid · ODC
386068.g17.t1Alkaloid · ODC
386068.g17.t1.1.5db1540cAlkaloid · ODC
386100.g25.t1Alkaloid · ODC
420150.g3.t1Alkaloid · ODC
420151.g3.t1Alkaloid · ODC
435324.g4.t1Alkaloid · ODC
435325.g4.t1Alkaloid · ODC
503.g13.t1Alkaloid · ODC
519.g47.t1Alkaloid · ODC
554.g17.t1Alkaloid · ODC
554.g41.t1Alkaloid · ODC
556.g170.t1Alkaloid · ODC
666.g4.t1Alkaloid · ODC
670.g25.t1Alkaloid · ODC
680.g68.t1Alkaloid · ODC
1737.g20.t1Alkaloid · PMT
1782.g10.t1Alkaloid · PMT
1782.g11.t1Alkaloid · PMT
1782.g12.t1Alkaloid · PMT
1782.g3.t1Alkaloid · PMT
1782.g6.t1Alkaloid · PMT
1782.g7.t1_1782.g8.t1Alkaloid · PMT
1938.g25.t1Alkaloid · PMT
1967.g23.t1Alkaloid · PMT
1967.g36.t1Alkaloid · PMT
312957.g1.t1Alkaloid · PMT
312957.g3.t1Alkaloid · PMT
355497.g2.t1Alkaloid · PMT
359142.g2.t1Alkaloid · PMT

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.