Species pathway expression context

Ocimum basilicum

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Ocimum_basilicum.gene_tpm_log1p.tsv
Samples
10
Matrix genes
65,635
Expressed genes
59,568
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
CandidateCardinal_flower-1Cardinal_flower-2Cardinal_flower-3Cardinal_leaf-1Cardinal_leaf-2Cardinal_leaf-3Sweet_basil_flowerSweet_basil_leafSweet_basil_rootSweet_basil_stem
360847.g2.t1Alkaloid · PMT
370152.g3.t1Alkaloid · PMT
373985.g3.t1Alkaloid · PMT
375376.g2.t1Alkaloid · PMT
375503.g2.t1Alkaloid · PMT
382284.g26.t1Alkaloid · PMT
382699.g13.t1Alkaloid · PMT
382699.g15.t1Alkaloid · PMT
382699.g17.t1Alkaloid · PMT
383458.g75.t1Alkaloid · PMT
383458.g77.t1Alkaloid · PMT
383458.g80.t1Alkaloid · PMT
383458.g82.t1Alkaloid · PMT
383685.g62.t1Alkaloid · PMT
383685.g66.t1Alkaloid · PMT
383685.g69.t1Alkaloid · PMT
384444.g15.t1Alkaloid · PMT
384969.g43.t1Alkaloid · PMT
539.g32.t1Alkaloid · PMT
539.g33.t1Alkaloid · PMT
539.g34.t1Alkaloid · PMT
539.g42.t1Alkaloid · PMT
539.g46.t1Alkaloid · PMT
539.g47.t1Alkaloid · PMT
539.g51.t1Alkaloid · PMT
539.g52.t1Alkaloid · PMT
539.g58.t1Alkaloid · PMT
549.g150.t1Alkaloid · PMT
549.g432.t1Alkaloid · PMT
549.g433.t1Alkaloid · PMT
549.g439.t1Alkaloid · PMT
549.g440.t1Alkaloid · PMT
549.g444.t1Alkaloid · PMT
549.g446.t1Alkaloid · PMT
549.g449.t1Alkaloid · PMT
725.g45.t1Alkaloid · PMT
1167.g1.t1Alkaloid · PYKS
1225.g22.t1Alkaloid · PYKS
1275.g7.t1Alkaloid · PYKS
1568.g59.t1Alkaloid · PYKS
1641.g20.t1Alkaloid · PYKS
1830.g16.t1Alkaloid · PYKS
1910.g73.t1Alkaloid · PYKS
366400.g1.t1Alkaloid · PYKS
371576.g1.t1Alkaloid · PYKS
379969.g33.t1Alkaloid · PYKS
379969.g35.t1Alkaloid · PYKS
381291.g14.t1Alkaloid · PYKS
381425.g35.t1Alkaloid · PYKS
382557.g17.t1Alkaloid · PYKS

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.