Species pathway expression context

Ocimum basilicum

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Ocimum_basilicum.gene_tpm_log1p.tsv
Samples
10
Matrix genes
65,635
Expressed genes
59,568
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
CandidateCardinal_flower-1Cardinal_flower-2Cardinal_flower-3Cardinal_leaf-1Cardinal_leaf-2Cardinal_leaf-3Sweet_basil_flowerSweet_basil_leafSweet_basil_rootSweet_basil_stem
383527.g51.t1Alkaloid · 8HGO
383666.g12.t1Alkaloid · 8HGO
383666.g17.t1Alkaloid · 8HGO
383727.g69.t1_383727.g70.t1Alkaloid · 8HGO
384083.g2.t1Alkaloid · 8HGO
384091.g23.t1Alkaloid · 8HGO
384091.g23.t1.1.5db1536bAlkaloid · 8HGO
385199.g117.t1Alkaloid · 8HGO
385199.g117.t1.1.5db153c8Alkaloid · 8HGO
385247.g2.t1Alkaloid · 8HGO
486994.g1.t1Alkaloid · 8HGO
486996.g1.t1Alkaloid · 8HGO
548.g31.t1Alkaloid · 8HGO
757.g294.t1Alkaloid · 8HGO
829.g10.t1Alkaloid · 8HGO
962.g1.t1Alkaloid · 8HGO
993.g1.t1Alkaloid · 8HGO
993.g6.t1Alkaloid · 8HGO
382931.g21.t1Alkaloid · ADC
383190.g1.t1Alkaloid · ADC
383641.g29.t1Alkaloid · ADC
385708.g22.t1Alkaloid · ADC
516.g111.t1Alkaloid · ADC
712.g19.t1Alkaloid · ADC
715.g21.t1Alkaloid · ADC
790.g16.t1Alkaloid · ADC
805.g30.t1Alkaloid · ADC
1923.g21.t1Alkaloid · CNMT
1982.g35.t1Alkaloid · CNMT
1982.g35.t1.1.5db15207Alkaloid · CNMT
1982.g35.t1.2.5db15207Alkaloid · CNMT
374406.g1.t1Alkaloid · CNMT
383635.g128.t1.1.5db15348Alkaloid · CNMT
383635.g128.t1.2.5db15348Alkaloid · CNMT
384393.g1.t1Alkaloid · CNMT
386100.g7.t1Alkaloid · CNMT
746.g130.t1Alkaloid · CNMT
746.g130.t1.1.5db15522Alkaloid · CNMT
746.g130.t1.2.5db15522Alkaloid · CNMT
1230.g8.t1Alkaloid · CODM_T6ODM
1289.g1.t1Alkaloid · CODM_T6ODM
1701.g183.t1Alkaloid · CODM_T6ODM
1720.g4.t1Alkaloid · CODM_T6ODM
1847.g22.t1Alkaloid · CODM_T6ODM
1889.g1.t1Alkaloid · CODM_T6ODM
1968.g144.t1Alkaloid · CODM_T6ODM
1968.g153.t1Alkaloid · CODM_T6ODM
1968.g154.t1Alkaloid · CODM_T6ODM
333112.g1.t1Alkaloid · CODM_T6ODM
350368.g2.t1Alkaloid · CODM_T6ODM

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.