Species pathway expression context

Ocimum basilicum

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Ocimum_basilicum.gene_tpm_log1p.tsv
Samples
10
Matrix genes
65,635
Expressed genes
59,568
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
CandidateCardinal_flower-1Cardinal_flower-2Cardinal_flower-3Cardinal_leaf-1Cardinal_leaf-2Cardinal_leaf-3Sweet_basil_flowerSweet_basil_leafSweet_basil_rootSweet_basil_stem
384039.g5.t1Phenylpropanoid · C4H_CYP73A
384229.g84.t1Phenylpropanoid · C4H_CYP73A
385146.g87.t1Phenylpropanoid · C4H_CYP73A
390632.g1.t1Phenylpropanoid · C4H_CYP73A
390633.g1.t1Phenylpropanoid · C4H_CYP73A
499.g69.t1Phenylpropanoid · C4H_CYP73A
507.g117.t1Phenylpropanoid · C4H_CYP73A
519.g121.t1Phenylpropanoid · C4H_CYP73A
656.g97.t1Phenylpropanoid · C4H_CYP73A
818.g14.t1Phenylpropanoid · C4H_CYP73A
838.g7.t1Phenylpropanoid · C4H_CYP73A
840.g16.t1Phenylpropanoid · C4H_CYP73A
899.g82.t1Phenylpropanoid · C4H_CYP73A
1231.g2.t1Phenylpropanoid · CAD
1242.g52.t1Phenylpropanoid · CAD
1869.g67.t1Phenylpropanoid · CAD
1873.g23.t1Phenylpropanoid · CAD
1873.g27.t1Phenylpropanoid · CAD
1940.g11.t1Phenylpropanoid · CAD
367092.g4.t1Phenylpropanoid · CAD
371939.g1.t1Phenylpropanoid · CAD
372.g67.t1Phenylpropanoid · CAD
377079.g1.t1.1.5db1526cPhenylpropanoid · CAD
379019.g6.t1Phenylpropanoid · CAD
379726.g6.t1Phenylpropanoid · CAD
380969.g5.t1Phenylpropanoid · CAD
380969.g8.t1Phenylpropanoid · CAD
382380.g38.t1Phenylpropanoid · CAD
382680.g50.t1Phenylpropanoid · CAD
382720.g26.t1Phenylpropanoid · CAD
382720.g30.t1Phenylpropanoid · CAD
383079.g19.t1Phenylpropanoid · CAD
383539.g35.t1Phenylpropanoid · CAD
383727.g69.t1_383727.g70.t1Phenylpropanoid · CAD
384091.g23.t1Phenylpropanoid · CAD
384091.g23.t1.1.5db1536bPhenylpropanoid · CAD
384929.g276.t1Phenylpropanoid · CAD
385316.g6.t1Phenylpropanoid · CAD
385316.g6.t1.1.5db153cePhenylpropanoid · CAD
385316.g6.t1.2.5db153cePhenylpropanoid · CAD
386072.g51.t1Phenylpropanoid · CAD
386161.g58.t1Phenylpropanoid · CAD
449.g75.t1Phenylpropanoid · CAD
520.g183.t1Phenylpropanoid · CAD
520.g183.t1.1.5db1547cPhenylpropanoid · CAD
520.g188.t1Phenylpropanoid · CAD
539426.g1.t1Phenylpropanoid · CAD
539427.g1.t1Phenylpropanoid · CAD
539432.g5.t1Phenylpropanoid · CAD
539443.g5.t1Phenylpropanoid · CAD

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.