LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 gene sequences

Coordinate-aware organelle record

Stachys alpina mitochondrial genome

Available OZ244443.1;OZ244445.1;OZ244442.1;OZ244444.1;OZ244441.1 358,072 bp 67 gene candidates
Accession record
Stachys alpina mitochondrial Biopython GenomeDiagram 1.79; GenBank local location segments. rps12 · OZ244443.1 · 30,217–30,591 bp · − nad3 · OZ244443.1 · 30,643–30,996 bp · − rrn26-1 · OZ244443.1 · 34,507–37,899 bp · − rrn26-2 · OZ244443.1 · 34,507–37,899 bp · − rrn26 · OZ244443.1 · 34,513–37,897 bp · − trnq-ttg · OZ244443.1 · 48,568–48,639 bp · − trnq-uug · OZ244443.1 · 48,568–48,639 bp · − rrn18 · OZ244445.1 · 2,585–4,272 bp · − rps10 · OZ244445.1 · 13,948–14,055 bp · − rps10 · OZ244445.1 · 14,847–15,041 bp · − atp4 · OZ244445.1 · 33,144–33,737 bp · − nad4L · OZ244445.1 · 33,914–34,213 bp · − nad1 · OZ244445.1 · 46,124–46,315 bp · − nad1 · OZ244445.1 · 47,542–47,631 bp · − rps13 · OZ244445.1 · 48,560–48,907 bp · − nad6 · OZ244442.1 · 9,509–10,123 bp · − rps4 · OZ244442.1 · 11,529–12,587 bp · − trnfm-cat-1 · OZ244442.1 · 24,460–24,531 bp · − trnfm-cat-2 · OZ244442.1 · 24,460–24,531 bp · − trnfm-cat · OZ244442.1 · 24,460–24,532 bp · − trnm · OZ244442.1 · 24,460–24,532 bp · − trnfm-cau · OZ244442.1 · 27,167–27,239 bp · − nad2 · OZ244442.1 · 58,800–58,985 bp · − nad2 · OZ244442.1 · 60,368–61,024 bp · − nad2 · OZ244442.1 · 62,469–62,624 bp · − trny-gta · OZ244442.1 · 63,153–63,236 bp · − trny-gua · OZ244442.1 · 63,154–63,236 bp · − trni-cat · OZ244442.1 · 73,559–73,641 bp · − trni-cat-1 · OZ244442.1 · 73,560–73,641 bp · − trni-cat-2 · OZ244442.1 · 73,560–73,641 bp · − trnm-cat · OZ244442.1 · 73,565–73,641 bp · − trnm-cau · OZ244442.1 · 73,565–73,641 bp · − trni-cau · OZ244442.1 · 73,565–73,641 bp · − cox1 · OZ244442.1 · 85,616–86,614 bp · − cox1 · OZ244442.1 · 87,441–88,157 bp · − cox2 · OZ244444.1 · 15,599–15,682 bp · − cox2 · OZ244444.1 · 20,045–20,743 bp · − nad4 · OZ244441.1 · 14,662–14,748 bp · − nad4 · OZ244441.1 · 17,089–17,508 bp · − nad4 · OZ244441.1 · 20,140–20,652 bp · − nad4 · OZ244441.1 · 22,058–22,510 bp · − nad5 · OZ244441.1 · 36,378–37,595 bp · − nad5 · OZ244441.1 · 38,447–38,683 bp · − cob · OZ244441.1 · 44,190–45,368 bp · − atp6 · OZ244441.1 · 60,223–60,891 bp · − nad7 · OZ244441.1 · 61,840–62,184 bp · − nad7 · OZ244441.1 · 63,444–64,154 bp · − nad7 · OZ244441.1 · 65,470–65,577 bp · − nad7 · OZ244441.1 · 66,417–66,581 bp · − rpl10 · OZ244443.1 · 39,262–39,747 bp · + atp8 · OZ244443.1 · 56,857–57,378 bp · + cox3 · OZ244443.1 · 57,925–58,719 bp · + sdh4 · OZ244443.1 · 58,650–58,967 bp · + trnh-gug · OZ244443.1 · 73,743–73,817 bp · + trnh-gtg · OZ244443.1 · 73,744–73,817 bp · + atp1 · OZ244443.1 · 78,957–80,483 bp · + rps3 · OZ244442.1 · 350–424 bp · + rps3 · OZ244442.1 · 2,120–3,730 bp · + rpl16 · OZ244442.1 · 3,660–4,133 bp · + atp9 · OZ244442.1 · 17,307–17,429 bp · + trne-ttc · OZ244442.1 · 44,252–44,323 bp · + trne-uuc · OZ244442.1 · 44,252–44,323 bp · + ccmFc · OZ244442.1 · 51,579–52,334 bp · + ccmFc · OZ244442.1 · 53,274–53,834 bp · + ccmFn · OZ244442.1 · 70,268–71,998 bp · + trns-gct · OZ244444.1 · 7,649–7,739 bp · + trns-gcu · OZ244444.1 · 7,650–7,737 bp · + trnf-gaa · OZ244444.1 · 8,107–8,175 bp · + trnl-uaa · OZ244444.1 · 8,107–8,175 bp · + trnp-tgg · OZ244444.1 · 8,428–8,502 bp · + trnp-ugg · OZ244444.1 · 8,428–8,502 bp · + ccmB · OZ244444.1 · 22,570–23,187 bp · + ccmC · OZ244444.1 · 32,426–33,118 bp · + trnl-caa · OZ244444.1 · 33,170–33,243 bp · + trni-caa · OZ244444.1 · 33,170–33,243 bp · + rpl2 · OZ244444.1 · 33,717–34,091 bp · + nad9 · OZ244441.1 · 2,201–2,770 bp · + trnw-cca · OZ244441.1 · 3,212–3,285 bp · + mttB · OZ244441.1 · 7,042–7,872 bp · + matR · OZ244441.1 · 9,208–11,082 bp · + trnd-gtc · OZ244441.1 · 25,214–25,290 bp · + trnd-guc · OZ244441.1 · 25,215–25,288 bp · + 0 kb 30 kb 60 kb 90 kb 120 kb 150 kb 180 kb 210 kb 240 kb 270 kb 300 kb 330 kb Stachys alpina ASSEMBLY COMPONENTS 5 components 358,072 bp · 67 gene candidates Gene function Ribosomal protein NADH dehydrogenase Ribosomal RNA Transfer RNA ATP synthase Cytochrome Other

Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. This record includes 67 homology-derived gene candidates. Candidate tracks show CDS/RNA intervals from the local annotation and its original homology evidence table; recorded discontinuous parts are drawn separately. These candidates are not original NCBI gene annotations. Hover for coordinates; click a segment to open its gene page. Assembly components are concatenated in accession order for a coordinate overview; this does not establish physical connections. A circular layout does not establish a physical master-circle configuration. Biopython GenomeDiagram.

Gene-position browser

Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.

82 local segments
GeneTypeGroupAccessionStrandStartEndLength
rps12CDS candidateribosomal-proteinOZ244443.1−3021730591375
nad3CDS candidatenad-dehydrogenaseOZ244443.1−3064330996354
rrn26-1rRNA candidateribosomal-rnaOZ244443.1−34507378993393
rrn26-2rRNA candidateribosomal-rnaOZ244443.1−34507378993393
rrn26rRNA candidateribosomal-rnaOZ244443.1−34513378973385
rpl10CDS candidateribosomal-proteinOZ244443.1+3926239747486
trnq-ttgtRNA candidatetranslation-rnaOZ244443.1−485684863972
trnq-uugtRNA candidatetranslation-rnaOZ244443.1−485684863972
atp8CDS candidateatp-synthaseOZ244443.1+5685757378522
cox3CDS candidatecytochromeOZ244443.1+5792558719795
sdh4CDS candidateotherOZ244443.1+5865058967318
trnh-gugtRNA candidatetranslation-rnaOZ244443.1+737437381775
trnh-gtgtRNA candidatetranslation-rnaOZ244443.1+737447381774
atp1CDS candidateatp-synthaseOZ244443.1+78957804831527
rrn18rRNA candidateribosomal-rnaOZ244445.1−258542721688
rps10CDS candidateribosomal-proteinOZ244445.1−1394814055108
rps10CDS candidateribosomal-proteinOZ244445.1−1484715041195
atp4CDS candidateatp-synthaseOZ244445.1−3314433737594
nad4LCDS candidatenad-dehydrogenaseOZ244445.1−3391434213300
nad1CDS candidatenad-dehydrogenaseOZ244445.1−4612446315192
nad1CDS candidatenad-dehydrogenaseOZ244445.1−475424763190
rps13CDS candidateribosomal-proteinOZ244445.1−4856048907348
rps3CDS candidateribosomal-proteinOZ244442.1+35042475
rps3CDS candidateribosomal-proteinOZ244442.1+212037301611
rpl16CDS candidateribosomal-proteinOZ244442.1+36604133474
nad6CDS candidatenad-dehydrogenaseOZ244442.1−950910123615
rps4CDS candidateribosomal-proteinOZ244442.1−11529125871059
atp9CDS candidateatp-synthaseOZ244442.1+1730717429123
trnfm-cat-1tRNA candidatetranslation-rnaOZ244442.1−244602453172
trnfm-cat-2tRNA candidatetranslation-rnaOZ244442.1−244602453172
trnfm-cattRNA candidatetranslation-rnaOZ244442.1−244602453273
trnmtRNA candidatetranslation-rnaOZ244442.1−244602453273
trnfm-cautRNA candidatetranslation-rnaOZ244442.1−271672723973
trne-ttctRNA candidatetranslation-rnaOZ244442.1+442524432372
trne-uuctRNA candidatetranslation-rnaOZ244442.1+442524432372
ccmFcCDS candidatecytochromeOZ244442.1+5157952334756
ccmFcCDS candidatecytochromeOZ244442.1+5327453834561
nad2CDS candidatenad-dehydrogenaseOZ244442.1−5880058985186
nad2CDS candidatenad-dehydrogenaseOZ244442.1−6036861024657
nad2CDS candidatenad-dehydrogenaseOZ244442.1−6246962624156
trny-gtatRNA candidatetranslation-rnaOZ244442.1−631536323684
trny-guatRNA candidatetranslation-rnaOZ244442.1−631546323683
ccmFnCDS candidatecytochromeOZ244442.1+70268719981731
trni-cattRNA candidatetranslation-rnaOZ244442.1−735597364183
trni-cat-1tRNA candidatetranslation-rnaOZ244442.1−735607364182
trni-cat-2tRNA candidatetranslation-rnaOZ244442.1−735607364182
trni-cautRNA candidatetranslation-rnaOZ244442.1−735657364177
trnm-cattRNA candidatetranslation-rnaOZ244442.1−735657364177
trnm-cautRNA candidatetranslation-rnaOZ244442.1−735657364177
cox1CDS candidatecytochromeOZ244442.1−8561686614999
cox1CDS candidatecytochromeOZ244442.1−8744188157717
trns-gcttRNA candidatetranslation-rnaOZ244444.1+7649773991
trns-gcutRNA candidatetranslation-rnaOZ244444.1+7650773788
trnf-gaatRNA candidatetranslation-rnaOZ244444.1+8107817569
trnl-uaatRNA candidatetranslation-rnaOZ244444.1+8107817569
trnp-tggtRNA candidatetranslation-rnaOZ244444.1+8428850275
trnp-uggtRNA candidatetranslation-rnaOZ244444.1+8428850275
cox2CDS candidatecytochromeOZ244444.1−155991568284
cox2CDS candidatecytochromeOZ244444.1−2004520743699
ccmBCDS candidatecytochromeOZ244444.1+2257023187618
ccmCCDS candidatecytochromeOZ244444.1+3242633118693
trni-caatRNA candidatetranslation-rnaOZ244444.1+331703324374
trnl-caatRNA candidatetranslation-rnaOZ244444.1+331703324374
rpl2CDS candidateribosomal-proteinOZ244444.1+3371734091375
nad9CDS candidatenad-dehydrogenaseOZ244441.1+22012770570
trnw-ccatRNA candidatetranslation-rnaOZ244441.1+3212328574
mttBCDS candidateotherOZ244441.1+70427872831
matRCDS candidateotherOZ244441.1+9208110821875
nad4CDS candidatenad-dehydrogenaseOZ244441.1−146621474887
nad4CDS candidatenad-dehydrogenaseOZ244441.1−1708917508420
nad4CDS candidatenad-dehydrogenaseOZ244441.1−2014020652513
nad4CDS candidatenad-dehydrogenaseOZ244441.1−2205822510453
trnd-gtctRNA candidatetranslation-rnaOZ244441.1+252142529077
trnd-guctRNA candidatetranslation-rnaOZ244441.1+252152528874
nad5CDS candidatenad-dehydrogenaseOZ244441.1−36378375951218
nad5CDS candidatenad-dehydrogenaseOZ244441.1−3844738683237
cobCDS candidatecytochromeOZ244441.1−44190453681179
atp6CDS candidateatp-synthaseOZ244441.1−6022360891669
nad7CDS candidatenad-dehydrogenaseOZ244441.1−6184062184345
nad7CDS candidatenad-dehydrogenaseOZ244441.1−6344464154711
nad7CDS candidatenad-dehydrogenaseOZ244441.1−6547065577108
nad7CDS candidatenad-dehydrogenaseOZ244441.1−6641766581165

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources
Mitochondrial genomeOZ244443.1Mitochondrial genomeOZ244445.1Mitochondrial genomeOZ244442.1Mitochondrial genomeOZ244444.1Mitochondrial genomeOZ244441.1