CHS Family · LamiOmicsDB

Evidence profile

Available evidence layers

◆Candidate identifiers1,120 public species-linked identifiers can be inspected.

GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.

MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.

100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta: Not calculated
Prevalence delta: Not calculated
Comparable source: PlantSME family assignments
Comparable source count: 1,166
Public candidate count: 1,120
Evidence mode: plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

Species	Evidence state	Source count	Candidate IDs	Expression
Pogostemon cablinLamioideae · Pogostemon	Stable locus	96	50	Available
Ocimum basilicumNepetoideae · Ocimum	Stable locus	50	50	Available
Teucrium chamaedrysAjugoideae · Teucrium	Stable locus	35	35	No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne	Stable locus	34	34	No matrix
Glechoma hederaceaNepetoideae · Glechoma	Stable locus	23	23	No matrix
Ocimum tenuiflorumNepetoideae · Ocimum	Stable locus	23	23	No matrix
Nepeta catariaNepetoideae · Nepeta	Stable locus	21	21	Available
Teucrium marumAjugoideae · Teucrium	Stable locus	21	21	No matrix
Elsholtzia splendensNepetoideae · Elsholtzia	Stable locus	20	20	No matrix
Hyptis suaveolensNepetoideae · Hyptis	Stable locus	20	20	No matrix
Origanum majoranaNepetoideae · Origanum	Stable locus	19	19	No matrix
Plectranthus barbatusNepetoideae · Plectranthus	Stable locus	19	19	No matrix
Glechoma longitubaNepetoideae · Glechoma	Stable locus	18	18	No matrix
Perilla frutescensNepetoideae · Perilla	Stable locus	18	18	No matrix
Phlomoides rotataLamioideae · Phlomoides	Stable locus	18	18	No matrix
Callicarpa americanaCallicarpoideae · Callicarpa	Stable locus	17	17	No matrix
Collinsonia canadensisNepetoideae · Collinsonia	Stable locus	17	17	No matrix
Origanum vulgareNepetoideae · Origanum	Stable locus	17	17	No matrix
Salvia rosmarinusNepetoideae · Salvia	Stable locus	17	17	Available
Salvia splendensNepetoideae · Salvia	Stable locus	17	17	No matrix
Clinopodium barosmumNepetoideae · Clinopodium	Stable locus	16	16	No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia	Stable locus	16	16	No matrix
Rotheca myricoidesAjugoideae · Rotheca	Stable locus	16	16	No matrix
Gmelina philippensisPremnoideae · Gmelina	Stable locus	15	15	No matrix
Leonurus cardiacaLamioideae · Leonurus	Stable locus	15	15	No matrix
Lycopus americanusNepetoideae · Lycopus	Stable locus	15	15	No matrix
Melissa officinalisNepetoideae · Melissa	Stable locus	15	15	No matrix
Mentha x piperitaNepetoideae · Mentha	Stable locus	15	15	No matrix
Salvia officinalisNepetoideae · Salvia	Stable locus	15	15	No matrix
Cornutia pyramidataPremnoideae · Cornutia	Stable locus	14	14	No matrix
Perilla citriodoraNepetoideae · Perilla	Stable locus	14	14	No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla	Stable locus	14	14	No matrix
Stachys officinalisLamioideae · Stachys	Stable locus	14	14	No matrix
Isodon serraNepetoideae · Isodon	Stable locus	13	13	No matrix
Lavandula angustifoliaNepetoideae · Lavandula	Stable locus	13	13	No matrix
Premna microphyllaPremnoideae · Premna	Stable locus	13	13	No matrix
Thymus vulgarisNepetoideae · Thymus	Stable locus	13	13	No matrix
Ballota pseudodictamnusLamioideae · Ballota	Stable locus	12	12	No matrix
Isodon lophanthoidesNepetoideae · Isodon	Stable locus	12	12	No matrix
Leonotis leonurusLamioideae · Leonotis	Stable locus	12	12	No matrix
Mentha spicataNepetoideae · Mentha	Stable locus	12	12	No matrix
Salvia bowleyanaNepetoideae · Salvia	Stable locus	12	12	No matrix
Salvia hispanicaNepetoideae · Salvia	Stable locus	12	12	No matrix
Tectona grandisTectonoideae · Tectona	Stable locus	12	12	Available
Ajuga reptansAjugoideae · Ajuga	Stable locus	11	11	No matrix
Clinopodium gracileNepetoideae · Clinopodium	Stable locus	11	11	No matrix
Hyssopus officinalisNepetoideae · Hyssopus	Stable locus	11	11	No matrix
Monarda didymaNepetoideae · Monarda	Stable locus	11	11	No matrix
Mosla soochowensisNepetoideae · Mosla	Stable locus	11	11	No matrix
Nepeta mussiniiNepetoideae · Nepeta	Stable locus	11	11	Available
Phlomis fruticosaLamioideae · Phlomis	Stable locus	11	11	No matrix
Salvia miltiorrhizaNepetoideae · Salvia	Stable locus	11	11	Available
Agastache foeniculumNepetoideae · Agastache	Stable locus	10	10	No matrix
Marrubium vulgareLamioideae · Marrubium	Stable locus	10	10	No matrix
Mentha longifoliaNepetoideae · Mentha	Stable locus	10	10	Available
Mosla chinensisNepetoideae · Mosla	Stable locus	10	10	No matrix
Prunella vulgarisNepetoideae · Prunella	Stable locus	10	10	No matrix
Salvia divinorumNepetoideae · Salvia	Stable locus	10	10	No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria	Stable locus	10	10	No matrix
Vitex agnus-castusViticoideae · Vitex	Stable locus	10	10	No matrix
Agastache rugosaNepetoideae · Agastache	Stable locus	9	9	No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa	Stable locus	9	9	No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum	Stable locus	9	9	No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia	Stable locus	9	9	No matrix
Marmoritis complanataNepetoideae · Marmoritis	Stable locus	9	9	No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta	Stable locus	9	9	No matrix
Teucrium canadenseAjugoideae · Teucrium	Stable locus	9	9	No matrix
Thymus quinquecostatusNepetoideae · Thymus	Stable locus	9	9	No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum	Stable locus	8	8	No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera	Stable locus	8	8	No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex	Stable locus	7	7	No matrix
Westringia fruticosaProstantheroideae · Westringia	Stable locus	7	7	No matrix
Ajuga decumbensAjugoideae · Ajuga	Stable locus	6	6	No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum	Stable locus	6	6	No matrix
Lamium albumLamioideae · Lamium	Stable locus	6	6	No matrix
Leonurus japonicusLamioideae · Leonurus	Stable locus	6	6	No matrix
Salvia sclareaNepetoideae · Salvia	Stable locus	6	6	No matrix
Scutellaria barbataScutellarioideae · Scutellaria	Stable locus	6	6	No matrix
Congea tomentosaSymphorematoideae · Congea	Stable locus	5	5	No matrix
Leonurus sibiricusLamioideae · Leonurus	Stable locus	5	5	No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Candidate ID	Species	Pathway / family	Evidence	Confidence	Identity	HMM score
KAL8463358.1	Phlomoides rotata	Flavonoid · `CHS`	blast	Medium	78.6%	—
KAL8474161.1	Phlomoides rotata	Flavonoid · `CHS`	blast	Medium	62.7%	—
KAL8480504.1	Phlomoides rotata	Flavonoid · `CHS`	blast	Medium	75.4%	—
LAAL_c11708_g1_i1_len_315	Lamium album	Flavonoid · `CHS`	blast	Medium	79.7%	—
LAAL_c22948_g1_i1_len_657	Lamium album	Flavonoid · `CHS`	blast	Medium	50.9%	—
LAAN_c123919_g1_i1_len_262	Lavandula angustifolia	Flavonoid · `CHS`	blast	Medium	39.5%	—
LAAN_c32860_g2_i1_len_547	Lavandula angustifolia	Flavonoid · `CHS`	blast	Medium	36.3%	—
LAAN_c36405_g1_i1_len_396	Lavandula angustifolia	Flavonoid · `CHS`	blast	Medium	58.3%	—
LAAN_c4037_g1_i1_len_317	Lavandula angustifolia	Flavonoid · `CHS`	blast	Medium	50.5%	—
LAAN_c44516_g1_i1_len_343	Lavandula angustifolia	Flavonoid · `CHS`	blast	Medium	66.1%	—
LAAN_c55299_g3_i2_len_880	Lavandula angustifolia	Flavonoid · `CHS`	blast	Medium	44.0%	—
LAAN_c55299_g5_i1_len_691	Lavandula angustifolia	Flavonoid · `CHS`	blast	Medium	50.0%	—
LAAN_c56298_g3_i2_len_1064	Lavandula angustifolia	Flavonoid · `CHS`	blast	Medium	56.4%	—
LECA_c2102_g1_i1_len_285	Leonurus cardiaca	Flavonoid · `CHS`	blast	Medium	58.5%	—
LECA_c21924_g1_i1_len_956	Leonurus cardiaca	Flavonoid · `CHS`	blast	Medium	56.1%	—
LECA_c23454_g1_i2_len_792	Leonurus cardiaca	Flavonoid · `CHS`	blast	Medium	56.3%	—
LECA_c25908_g1_i1_len_722	Leonurus cardiaca	Flavonoid · `CHS`	blast	Medium	77.6%	—
LECA_c61200_g1_i1_len_285	Leonurus cardiaca	Flavonoid · `CHS`	blast	Medium	39.7%	—
LECA_c81510_g1_i1_len_399	Leonurus cardiaca	Flavonoid · `CHS`	blast	Medium	39.3%	—
LELE_c21139_g1_i1_len_734	Leonotis leonurus	Flavonoid · `CHS`	blast	Medium	76.7%	—
LELE_c21200_g1_i1_len_731	Leonotis leonurus	Flavonoid · `CHS`	blast	Medium	65.6%	—
LELE_c39068_g1_i1_len_458	Leonotis leonurus	Flavonoid · `CHS`	blast	Medium	67.4%	—
LELE_c55553_g1_i1_len_769	Leonotis leonurus	Flavonoid · `CHS`	blast	Medium	55.7%	—
LELE_c65486_g1_i1_len_351	Leonotis leonurus	Flavonoid · `CHS`	blast	Medium	43.5%	—
LYAM_c10515_g1_i1_len_362	Lycopus americanus	Flavonoid · `CHS`	blast	Medium	41.8%	—
LYAM_c20885_g1_i1_len_804	Lycopus americanus	Flavonoid · `CHS`	blast	Medium	40.4%	—
LYAM_c27667_g2_i1_len_474	Lycopus americanus	Flavonoid · `CHS`	blast	Medium	56.8%	—
LYAM_c33543_g1_i2_len_1377	Lycopus americanus	Flavonoid · `CHS`	blast	Medium	46.5%	—
LYAM_c34053_g3_i1_len_2169	Lycopus americanus	Flavonoid · `CHS`	blast	Medium	45.1%	—
LYAM_c36070_g1_i1_len_898	Lycopus americanus	Flavonoid · `CHS`	blast	Medium	43.8%	—
LYAM_c37266_g3_i1_len_1091	Lycopus americanus	Flavonoid · `CHS`	blast	Medium	55.2%	—
LYAM_c78568_g1_i1_len_278	Lycopus americanus	Flavonoid · `CHS`	blast	Medium	50.0%	—
LYAM_c90419_g1_i1_len_404	Lycopus americanus	Flavonoid · `CHS`	blast	Medium	50.6%	—
LYAM_c90590_g1_i1_len_876	Lycopus americanus	Flavonoid · `CHS`	blast	Medium	38.0%	—
MAVU_c11606_g1_i1_len_982	Marrubium vulgare	Flavonoid · `CHS`	blast	Medium	40.2%	—
MAVU_c17743_g1_i1_len_556	Marrubium vulgare	Flavonoid · `CHS`	blast	Medium	48.6%	—
MAVU_c34935_g1_i1_len_304	Marrubium vulgare	Flavonoid · `CHS`	blast	Medium	59.1%	—
MAVU_c57657_g1_i1_len_271	Marrubium vulgare	Flavonoid · `CHS`	blast	Medium	64.0%	—
MEOF_c11548_g2_i1_len_367	Melissa officinalis	Flavonoid · `CHS`	blast	Medium	36.3%	—
MEOF_c11548_g3_i1_len_331	Melissa officinalis	Flavonoid · `CHS`	blast	Medium	70.3%	—
MEOF_c12099_g1_i1_len_856	Melissa officinalis	Flavonoid · `CHS`	blast	Medium	47.0%	—
MEOF_c19667_g6_i1_len_967	Melissa officinalis	Flavonoid · `CHS`	blast	Medium	66.3%	—
MEOF_c43041_g1_i1_len_317	Melissa officinalis	Flavonoid · `CHS`	blast	Medium	33.3%	—
MEOF_c60022_g1_i1_len_530	Melissa officinalis	Flavonoid · `CHS`	blast	Medium	40.7%	—
MEPI_c17924_g1_i1_len_291	Mentha x piperita	Flavonoid · `CHS`	blast	Medium	37.1%	—
MEPI_c42182_g1_i1_len_483	Mentha x piperita	Flavonoid · `CHS`	blast	Medium	41.3%	—
MEPI_c50296_g2_i1_len_515	Mentha x piperita	Flavonoid · `CHS`	blast	Medium	69.7%	—
MEPI_c51349_g1_i1_len_876	Mentha x piperita	Flavonoid · `CHS`	blast	Medium	48.0%	—
MEPI_c51349_g2_i2_len_259	Mentha x piperita	Flavonoid · `CHS`	blast	Medium	78.2%	—
MEPI_c51349_g3_i1_len_1186	Mentha x piperita	Flavonoid · `CHS`	blast	Medium	39.9%	—