CHS Family · LamiOmicsDB

Evidence profile

Available evidence layers

◆Candidate identifiers1,120 public species-linked identifiers can be inspected.

GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.

MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.

100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta: Not calculated
Prevalence delta: Not calculated
Comparable source: PlantSME family assignments
Comparable source count: 1,166
Public candidate count: 1,120
Evidence mode: plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

Species	Evidence state	Source count	Candidate IDs	Expression
Pogostemon cablinLamioideae · Pogostemon	Stable locus	96	50	Available
Ocimum basilicumNepetoideae · Ocimum	Stable locus	50	50	Available
Teucrium chamaedrysAjugoideae · Teucrium	Stable locus	35	35	No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne	Stable locus	34	34	No matrix
Glechoma hederaceaNepetoideae · Glechoma	Stable locus	23	23	No matrix
Ocimum tenuiflorumNepetoideae · Ocimum	Stable locus	23	23	No matrix
Nepeta catariaNepetoideae · Nepeta	Stable locus	21	21	Available
Teucrium marumAjugoideae · Teucrium	Stable locus	21	21	No matrix
Elsholtzia splendensNepetoideae · Elsholtzia	Stable locus	20	20	No matrix
Hyptis suaveolensNepetoideae · Hyptis	Stable locus	20	20	No matrix
Origanum majoranaNepetoideae · Origanum	Stable locus	19	19	No matrix
Plectranthus barbatusNepetoideae · Plectranthus	Stable locus	19	19	No matrix
Glechoma longitubaNepetoideae · Glechoma	Stable locus	18	18	No matrix
Perilla frutescensNepetoideae · Perilla	Stable locus	18	18	No matrix
Phlomoides rotataLamioideae · Phlomoides	Stable locus	18	18	No matrix
Callicarpa americanaCallicarpoideae · Callicarpa	Stable locus	17	17	No matrix
Collinsonia canadensisNepetoideae · Collinsonia	Stable locus	17	17	No matrix
Origanum vulgareNepetoideae · Origanum	Stable locus	17	17	No matrix
Salvia rosmarinusNepetoideae · Salvia	Stable locus	17	17	Available
Salvia splendensNepetoideae · Salvia	Stable locus	17	17	No matrix
Clinopodium barosmumNepetoideae · Clinopodium	Stable locus	16	16	No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia	Stable locus	16	16	No matrix
Rotheca myricoidesAjugoideae · Rotheca	Stable locus	16	16	No matrix
Gmelina philippensisPremnoideae · Gmelina	Stable locus	15	15	No matrix
Leonurus cardiacaLamioideae · Leonurus	Stable locus	15	15	No matrix
Lycopus americanusNepetoideae · Lycopus	Stable locus	15	15	No matrix
Melissa officinalisNepetoideae · Melissa	Stable locus	15	15	No matrix
Mentha x piperitaNepetoideae · Mentha	Stable locus	15	15	No matrix
Salvia officinalisNepetoideae · Salvia	Stable locus	15	15	No matrix
Cornutia pyramidataPremnoideae · Cornutia	Stable locus	14	14	No matrix
Perilla citriodoraNepetoideae · Perilla	Stable locus	14	14	No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla	Stable locus	14	14	No matrix
Stachys officinalisLamioideae · Stachys	Stable locus	14	14	No matrix
Isodon serraNepetoideae · Isodon	Stable locus	13	13	No matrix
Lavandula angustifoliaNepetoideae · Lavandula	Stable locus	13	13	No matrix
Premna microphyllaPremnoideae · Premna	Stable locus	13	13	No matrix
Thymus vulgarisNepetoideae · Thymus	Stable locus	13	13	No matrix
Ballota pseudodictamnusLamioideae · Ballota	Stable locus	12	12	No matrix
Isodon lophanthoidesNepetoideae · Isodon	Stable locus	12	12	No matrix
Leonotis leonurusLamioideae · Leonotis	Stable locus	12	12	No matrix
Mentha spicataNepetoideae · Mentha	Stable locus	12	12	No matrix
Salvia bowleyanaNepetoideae · Salvia	Stable locus	12	12	No matrix
Salvia hispanicaNepetoideae · Salvia	Stable locus	12	12	No matrix
Tectona grandisTectonoideae · Tectona	Stable locus	12	12	Available
Ajuga reptansAjugoideae · Ajuga	Stable locus	11	11	No matrix
Clinopodium gracileNepetoideae · Clinopodium	Stable locus	11	11	No matrix
Hyssopus officinalisNepetoideae · Hyssopus	Stable locus	11	11	No matrix
Monarda didymaNepetoideae · Monarda	Stable locus	11	11	No matrix
Mosla soochowensisNepetoideae · Mosla	Stable locus	11	11	No matrix
Nepeta mussiniiNepetoideae · Nepeta	Stable locus	11	11	Available
Phlomis fruticosaLamioideae · Phlomis	Stable locus	11	11	No matrix
Salvia miltiorrhizaNepetoideae · Salvia	Stable locus	11	11	Available
Agastache foeniculumNepetoideae · Agastache	Stable locus	10	10	No matrix
Marrubium vulgareLamioideae · Marrubium	Stable locus	10	10	No matrix
Mentha longifoliaNepetoideae · Mentha	Stable locus	10	10	Available
Mosla chinensisNepetoideae · Mosla	Stable locus	10	10	No matrix
Prunella vulgarisNepetoideae · Prunella	Stable locus	10	10	No matrix
Salvia divinorumNepetoideae · Salvia	Stable locus	10	10	No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria	Stable locus	10	10	No matrix
Vitex agnus-castusViticoideae · Vitex	Stable locus	10	10	No matrix
Agastache rugosaNepetoideae · Agastache	Stable locus	9	9	No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa	Stable locus	9	9	No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum	Stable locus	9	9	No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia	Stable locus	9	9	No matrix
Marmoritis complanataNepetoideae · Marmoritis	Stable locus	9	9	No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta	Stable locus	9	9	No matrix
Teucrium canadenseAjugoideae · Teucrium	Stable locus	9	9	No matrix
Thymus quinquecostatusNepetoideae · Thymus	Stable locus	9	9	No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum	Stable locus	8	8	No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera	Stable locus	8	8	No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex	Stable locus	7	7	No matrix
Westringia fruticosaProstantheroideae · Westringia	Stable locus	7	7	No matrix
Ajuga decumbensAjugoideae · Ajuga	Stable locus	6	6	No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum	Stable locus	6	6	No matrix
Lamium albumLamioideae · Lamium	Stable locus	6	6	No matrix
Leonurus japonicusLamioideae · Leonurus	Stable locus	6	6	No matrix
Salvia sclareaNepetoideae · Salvia	Stable locus	6	6	No matrix
Scutellaria barbataScutellarioideae · Scutellaria	Stable locus	6	6	No matrix
Congea tomentosaSymphorematoideae · Congea	Stable locus	5	5	No matrix
Leonurus sibiricusLamioideae · Leonurus	Stable locus	5	5	No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Candidate ID	Species	Pathway / family	Evidence	Confidence	Identity	HMM score
MEPI_c59947_g2_i2_len_744	Mentha x piperita	Flavonoid · `CHS`	blast	Medium	66.2%	—
MEPI_c60775_g1_i1_len_915	Mentha x piperita	Flavonoid · `CHS`	blast	Medium	47.3%	—
MEPI_c63204_g1_i2_len_948	Mentha x piperita	Flavonoid · `CHS`	blast	Medium	49.0%	—
MEPI_c67739_g1_i1_len_331	Mentha x piperita	Flavonoid · `CHS`	blast	Medium	49.1%	—
MESP_c24296_g1_i1_len_259	Mentha spicata	Flavonoid · `CHS`	blast	Medium	83.9%	—
MESP_c33436_g1_i1_len_534	Mentha spicata	Flavonoid · `CHS`	blast	Medium	64.7%	—
MESP_c34640_g1_i1_len_977	Mentha spicata	Flavonoid · `CHS`	blast	Medium	72.5%	—
MESP_c38202_g2_i1_len_729	Mentha spicata	Flavonoid · `CHS`	blast	Medium	44.8%	—
MESP_c38202_g3_i1_len_908	Mentha spicata	Flavonoid · `CHS`	blast	Medium	57.0%	—
MESP_c38781_g1_i1_len_1062	Mentha spicata	Flavonoid · `CHS`	blast	Medium	50.7%	—
MESP_c42220_g2_i1_len_1202	Mentha spicata	Flavonoid · `CHS`	blast	Medium	51.5%	—
MODI_c10023_g1_i1_len_417	Monarda didyma	Flavonoid · `CHS`	blast	Medium	62.2%	—
MODI_c16438_g1_i1_len_319	Monarda didyma	Flavonoid · `CHS`	blast	Medium	37.1%	—
MODI_c16941_g1_i1_len_658	Monarda didyma	Flavonoid · `CHS`	blast	Medium	40.1%	—
MODI_c28488_g1_i1_len_632	Monarda didyma	Flavonoid · `CHS`	blast	Medium	50.9%	—
MODI_c34461_g2_i2_len_975	Monarda didyma	Flavonoid · `CHS`	blast	Medium	47.1%	—
MODI_c41318_g4_i4_len_1083	Monarda didyma	Flavonoid · `CHS`	blast	Medium	56.1%	—
Mlonscaffold_10_length_330881730009530.1.v1.326	Mentha longifolia	Flavonoid · `CHS`	blast	Medium	42.9%	—
ORMA_c12323_g1_i1_len_432	Origanum majorana	Flavonoid · `CHS`	blast	Medium	61.6%	—
ORMA_c12858_g1_i1_len_365	Origanum majorana	Flavonoid · `CHS`	blast	Medium	48.9%	—
ORMA_c29975_g1_i1_len_417	Origanum majorana	Flavonoid · `CHS`	blast	Medium	50.0%	—
ORMA_c3220_g2_i1_len_702	Origanum majorana	Flavonoid · `CHS`	blast	Medium	59.1%	—
ORMA_c33755_g1_i1_len_476	Origanum majorana	Flavonoid · `CHS`	blast	Medium	35.1%	—
ORMA_c34257_g1_i1_len_341	Origanum majorana	Flavonoid · `CHS`	blast	Medium	49.1%	—
ORMA_c35388_g1_i1_len_1165	Origanum majorana	Flavonoid · `CHS`	blast	Medium	51.4%	—
ORMA_c43272_g2_i1_len_790	Origanum majorana	Flavonoid · `CHS`	blast	Medium	69.5%	—
ORMA_c8232_g1_i1_len_738	Origanum majorana	Flavonoid · `CHS`	blast	Medium	47.0%	—
PEAT_c20743_g1_i1_len_580	Perovskia atriplicifolia	Flavonoid · `CHS`	blast	Medium	63.5%	—
PEAT_c25039_g1_i1_len_540	Perovskia atriplicifolia	Flavonoid · `CHS`	blast	Medium	39.7%	—
PEAT_c42802_g2_i1_len_419	Perovskia atriplicifolia	Flavonoid · `CHS`	blast	Medium	40.4%	—
PEAT_c48141_g1_i1_len_292	Perovskia atriplicifolia	Flavonoid · `CHS`	blast	Medium	54.7%	—
PEAT_c69064_g1_i1_len_883	Perovskia atriplicifolia	Flavonoid · `CHS`	blast	Medium	70.3%	—
PEBA_c102119_g1_i1_len_300	Petraeovitex bambusetorium	Flavonoid · `CHS`	blast	Medium	69.1%	—
PEBA_c17440_g1_i1_len_811	Petraeovitex bambusetorium	Flavonoid · `CHS`	blast	Medium	55.7%	—
PEBA_c26264_g1_i1_len_499	Petraeovitex bambusetorium	Flavonoid · `CHS`	blast	Medium	73.3%	—
PEBA_c528_g1_i1_len_967	Petraeovitex bambusetorium	Flavonoid · `CHS`	blast	Medium	58.7%	—
PEBA_c8057_g1_i1_len_261	Petraeovitex bambusetorium	Flavonoid · `CHS`	blast	Medium	61.0%	—
PHFR_c41326_g1_i1_len_431	Phlomis fruticosa	Flavonoid · `CHS`	blast	Medium	80.6%	—
PHFR_c50427_g1_i1_len_671	Phlomis fruticosa	Flavonoid · `CHS`	blast	Medium	60.6%	—
PLBA_c107551_g1_i1_len_436	Plectranthus barbatus	Flavonoid · `CHS`	blast	Medium	64.1%	—
PLBA_c24487_g1_i2_len_976	Plectranthus barbatus	Flavonoid · `CHS`	blast	Medium	57.1%	—
PLBA_c39775_g1_i1_len_636	Plectranthus barbatus	Flavonoid · `CHS`	blast	Medium	46.7%	—
PLBA_c39775_g2_i1_len_724	Plectranthus barbatus	Flavonoid · `CHS`	blast	Medium	50.2%	—
PLBA_c76166_g1_i1_len_293	Plectranthus barbatus	Flavonoid · `CHS`	blast	Medium	65.5%	—
PLBA_c83863_g1_i1_len_379	Plectranthus barbatus	Flavonoid · `CHS`	blast	Medium	34.7%	—
PLBA_c85106_g1_i1_len_298	Plectranthus barbatus	Flavonoid · `CHS`	blast	Medium	41.9%	—
PLBA_c96000_g1_i1_len_310	Plectranthus barbatus	Flavonoid · `CHS`	blast	Medium	87.5%	—
PRLA_c105763_g1_i1_len_377	Prostanthera lasianthos	Flavonoid · `CHS`	blast	Medium	37.6%	—
PRLA_c109484_g1_i1_len_256	Prostanthera lasianthos	Flavonoid · `CHS`	blast	Medium	60.7%	—
PRLA_c54349_g1_i1_len_793	Prostanthera lasianthos	Flavonoid · `CHS`	blast	Medium	55.4%	—