LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

HYD1

HYD1 enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmeSteroid and sterol biosynthesis
Public candidate IDs
242
Species with candidates
80
Species with assignments
80
Source assignments
242
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers242 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
242
Public candidate count
242
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Pogostemon cablinLamioideae · Pogostemon Stable locus 1111 Available
Teucrium marumAjugoideae · Teucrium Stable locus 1010 No matrix
Salvia splendensNepetoideae · Salvia Stable locus 99 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 88 No matrix
Nepeta catariaNepetoideae · Nepeta Stable locus 88 Available
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 88 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 77 No matrix
Ocimum basilicumNepetoideae · Ocimum Stable locus 55 Available
Phlomoides rotataLamioideae · Phlomoides Stable locus 55 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 44 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 44 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 44 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 44 No matrix
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 44 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 44 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 44 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 44 Available
Agastache rugosaNepetoideae · Agastache Stable locus 33 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 33 No matrix
Isodon serraNepetoideae · Isodon Stable locus 33 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 33 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 33 Available
Nepeta mussiniiNepetoideae · Nepeta Stable locus 33 Available
Origanum vulgareNepetoideae · Origanum Stable locus 33 No matrix
Perilla frutescensNepetoideae · Perilla Stable locus 33 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 33 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 33 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 33 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 33 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 33 No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 33 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 33 Available
Thymus vulgarisNepetoideae · Thymus Stable locus 33 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 22 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 22 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 22 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 22 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 22 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 22 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 22 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 22 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 22 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 22 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 22 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 22 No matrix
Lamium albumLamioideae · Lamium Stable locus 22 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 22 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 22 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 22 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 22 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 22 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 22 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 22 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 22 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 22 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 22 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 22 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 22 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 22 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 22 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 22 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 22 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 22 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 22 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 22 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 22 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 22 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 22 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 22 Available
Salvia officinalisNepetoideae · Salvia Stable locus 22 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 22 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 22 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 22 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 22 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 22 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 22 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 22 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 11 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 11 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 11 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
XP_047938425.1
Salvia hispanicaSteroid / sterol · HYD1hmm Medium —54.9
XP_041995288.1
Salvia splendensSteroid / sterol · HYD1hmm Medium —54.7
AJRE_c36519_g1_i1_len_1819
Ajuga reptansSteroid / sterol · HYD1hmm Medium —54.6
Teum.01G034690.2
Teucrium marumSteroid / sterol · HYD1hmm Medium —54.6
Teum.01G034690.6
Teucrium marumSteroid / sterol · HYD1hmm Medium —54.6
XP_041991032.1
Salvia splendensSteroid / sterol · HYD1hmm Medium —54.6
726.g27.t1
Ocimum basilicumSteroid / sterol · HYD1hmm Medium —54.5
686.g25.t1
Ocimum basilicumSteroid / sterol · HYD1hmm Medium —54.4
Teucrium_chamaedrys__Tcha116895
Teucrium chamaedrysSteroid / sterol · HYD1hmm Medium —54.4
Teucrium_chamaedrys__Tcha164516
Teucrium chamaedrysSteroid / sterol · HYD1hmm Medium —54.1
CAame05G0019270.v1.94
Callicarpa americanaSteroid / sterol · HYD1hmm Medium —54.0
Lj1g24230.1
Leonurus japonicusSteroid / sterol · HYD1hmm Medium —54.0
Teucrium_chamaedrys__Tcha40022
Teucrium chamaedrysSteroid / sterol · HYD1hmm Medium —54.0
g8027.t1
Salvia sclareaSteroid / sterol · HYD1hmm Medium —54.0
MEOF_c12799_g1_i2_len_1913
Melissa officinalisSteroid / sterol · HYD1hmm Medium —53.9
XP_041995287.1
Salvia splendensSteroid / sterol · HYD1hmm Medium —53.9
evm.model.Chr03.816
Callicarpa nudifloraSteroid / sterol · HYD1hmm Medium —53.9
Teucrium_chamaedrys__Tcha106275
Teucrium chamaedrysSteroid / sterol · HYD1hmm Medium —53.8
PEAT_c37537_g1_i2_len_2179
Perovskia atriplicifoliaSteroid / sterol · HYD1hmm Medium —53.7
LAAL_c29429_g1_i3_len_2380
Lamium albumSteroid / sterol · HYD1hmm Medium —53.6
Sch000027020
Schizonepeta tenuifoliaSteroid / sterol · HYD1hmm Medium —53.6
CAame05G0019260.v1.94
Callicarpa americanaSteroid / sterol · HYD1hmm Medium —53.5
Ls2g28030.1
Leonurus sibiricusSteroid / sterol · HYD1hmm Medium —53.5
Teum.01G034690.3
Teucrium marumSteroid / sterol · HYD1hmm Medium —53.5
Teum.01G034690.5
Teucrium marumSteroid / sterol · HYD1hmm Medium —53.5
KAL8461653.1
Phlomoides rotataSteroid / sterol · HYD1hmm Medium —53.4
MACO_g21464.t1
Marmoritis complanataSteroid / sterol · HYD1hmm Medium —53.3
Roff8210500460
Salvia rosmarinusSteroid / sterol · HYD1hmm Medium —53.3
tectona_grandis_Tg02g11340.t1
Tectona grandisSteroid / sterol · HYD1hmm Medium —53.3
AGFO_c27868_g1_i1_len_2567
Agastache foeniculumSteroid / sterol · HYD1hmm Medium —52.8
AG34_scaffold3_00650T
Agastache rugosaSteroid / sterol · HYD1hmm Medium —52.7
g16032.t1
Ajuga decumbensSteroid / sterol · HYD1hmm Medium —52.6
ROMY_c78954_g1_i1_len_1886
Rotheca myricoidesSteroid / sterol · HYD1hmm Medium —52.5
COPY_c80357_g1_i1_len_2052
Cornutia pyramidataSteroid / sterol · HYD1hmm Medium —51.9
CLBU_c48592_g1_i2_len_2061
Clerodendrum bungeiSteroid / sterol · HYD1hmm Medium —51.6
HOSA_c38664_g1_i5_len_1802
Holmskioldia sanguineaSteroid / sterol · HYD1hmm Medium —51.6
LECA_c27126_g2_i5_len_1964
Leonurus cardiacaSteroid / sterol · HYD1hmm Medium —51.6
STOF_c61399_g1_i17_len_1949
Stachys officinalisSteroid / sterol · HYD1hmm Medium —51.6
MAVU_c28399_g1_i3_len_1710
Marrubium vulgareSteroid / sterol · HYD1hmm Medium —51.1
origanum_vulgare_230.g137.t1
Origanum vulgareSteroid / sterol · HYD1hmm Medium —51.0
SAOF_c30228_g1_i1_len_2062
Salvia officinalisSteroid / sterol · HYD1hmm Medium —50.9
Mc9g14990.1
Mosla chinensisSteroid / sterol · HYD1hmm Medium —50.7
LYAM_c29542_g1_i2_len_2001
Lycopus americanusSteroid / sterol · HYD1hmm Medium —50.6
Ms_c003g01468.1
Mosla soochowensisSteroid / sterol · HYD1hmm Medium —50.6
PHFR_c73263_g1_i1_len_1928
Phlomis fruticosaSteroid / sterol · HYD1hmm Medium —50.6
PRLA_c68120_g2_i2_len_1845
Prostanthera lasianthosSteroid / sterol · HYD1hmm Medium —50.3
DRSE_g8128.t1
Drepanocaryum sewerzowiiSteroid / sterol · HYD1hmm Medium —49.8
GWHPBJVA000621
Thymus quinquecostatusSteroid / sterol · HYD1hmm Medium —49.6
Roff10300041790
Salvia rosmarinusSteroid / sterol · HYD1hmm Medium —49.6
THVU_c74742_g1_i1_len_1833
Thymus vulgarisSteroid / sterol · HYD1hmm Medium —49.6