LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 gene sequences

Coordinate-aware organelle record

Scutellaria amoena mitochondrial genome

Available MT277281.1;MT277264.1;MT277181.1;MT277230.1 350,464 bp 76 gene candidates
DNA resources Accession record
Scutellaria amoena mitochondrial Biopython GenomeDiagram 1.79; GenBank local location segments. nad6 · MT277281.1 · 17,003–17,605 bp · − trnk-ttt · MT277281.1 · 32,311–32,385 bp · − trnk-uuu · MT277281.1 · 32,312–32,384 bp · − rpl10 · MT277281.1 · 35,554–36,029 bp · − nad1 · MT277264.1 · 1,329–1,520 bp · − nad1 · MT277264.1 · 2,767–2,856 bp · − rps13 · MT277264.1 · 3,797–4,144 bp · − atp6 · MT277264.1 · 13,080–13,748 bp · − cox2 · MT277264.1 · 24,243–24,326 bp · − cox2 · MT277264.1 · 29,515–30,213 bp · − trns-tga · MT277181.1 · 67–153 bp · − trns-uga · MT277181.1 · 67–153 bp · − rps14 · MT277181.1 · 43,632–43,991 bp · − rpl5 · MT277181.1 · 43,936–44,487 bp · − cob · MT277181.1 · 51,682–52,860 bp · − cox1 · MT277181.1 · 58,304–59,302 bp · − cox1 · MT277181.1 · 60,129–60,845 bp · − rps10 · MT277181.1 · 75,279–75,407 bp · − rps10 · MT277181.1 · 76,234–76,512 bp · − trnw-cca · MT277181.1 · 78,596–78,669 bp · − nad9 · MT277181.1 · 79,102–79,671 bp · − nad4 · MT277181.1 · 114,875–114,961 bp · − nad4 · MT277181.1 · 117,816–118,235 bp · − nad4 · MT277181.1 · 120,421–120,933 bp · − nad4 · MT277181.1 · 122,338–122,787 bp · − trnm · MT277181.1 · 137,336–137,407 bp · − trnfm-cat-1 · MT277181.1 · 137,336–137,407 bp · − trnfm-cat-2 · MT277181.1 · 137,336–137,407 bp · − trnfm-cat · MT277181.1 · 137,336–137,408 bp · − matR · MT277230.1 · 44,994–46,958 bp · − mttB · MT277230.1 · 48,291–49,124 bp · − trnfm-cau · MT277281.1 · 2,571–2,643 bp · + nad3 · MT277281.1 · 9,304–9,657 bp · + rps12 · MT277281.1 · 9,710–10,084 bp · + ccmFc · MT277281.1 · 29,067–29,834 bp · + ccmFc · MT277281.1 · 30,770–31,339 bp · + ccmB · MT277281.1 · 34,631–35,248 bp · + trnh-gug · MT277264.1 · 42,900–42,974 bp · + trnh-gtg · MT277264.1 · 42,901–42,974 bp · + rps4 · MT277264.1 · 48,429–49,499 bp · + rps3 · MT277264.1 · 49,677–49,751 bp · + rps3 · MT277264.1 · 51,444–53,063 bp · + rpl16 · MT277264.1 · 52,993–53,466 bp · + atp8 · MT277264.1 · 58,583–59,107 bp · + cox3 · MT277264.1 · 59,547–60,341 bp · + sdh4 · MT277264.1 · 60,272–60,720 bp · + trng-gcc · MT277181.1 · 1,521–1,592 bp · + trnq-ttg · MT277181.1 · 4,734–4,805 bp · + trnq-uug · MT277181.1 · 4,734–4,805 bp · + trnc-gca · MT277181.1 · 19,235–19,306 bp · + trnn-gtt · MT277181.1 · 21,432–21,503 bp · + trnn-guu · MT277181.1 · 21,432–21,503 bp · + trny-gua · MT277181.1 · 22,225–22,307 bp · + trny-gta · MT277181.1 · 22,225–22,308 bp · + nad2 · MT277181.1 · 22,836–22,991 bp · + nad2 · MT277181.1 · 24,430–25,068 bp · + nad2 · MT277181.1 · 26,471–26,656 bp · + rrn26-1 · MT277181.1 · 88,157–91,560 bp · + rrn26-2 · MT277181.1 · 88,157–91,560 bp · + rrn26 · MT277181.1 · 88,157–91,561 bp · + rrn18 · MT277181.1 · 103,424–105,110 bp · + trnf-gaa · MT277181.1 · 105,153–105,202 bp · + trnf-gaa · MT277181.1 · 145,385–145,458 bp · + trnl-uaa · MT277181.1 · 105,153–105,202 bp · + trnl-uaa · MT277181.1 · 145,385–145,458 bp · + trnd-gtc · MT277181.1 · 125,524–125,600 bp · + trne-ttc · MT277181.1 · 141,978–142,049 bp · + trne-uuc · MT277181.1 · 141,978–142,049 bp · + trns-gct · MT277181.1 · 144,946–145,028 bp · + trnd-guc · MT277181.1 · 144,946–145,028 bp · + trns-gcu · MT277181.1 · 144,946–145,028 bp · + trnp-tgg · MT277181.1 · 145,713–145,787 bp · + trnp-ugg · MT277181.1 · 145,713–145,787 bp · + ccmFn · MT277181.1 · 149,453–151,183 bp · + nad4L · MT277181.1 · 164,839–165,138 bp · + atp4 · MT277181.1 · 165,315–165,908 bp · + atp1 · MT277181.1 · 174,434–175,951 bp · + trnm-cat · MT277230.1 · 189–265 bp · + trnm-cau · MT277230.1 · 189–265 bp · + trni-cau · MT277230.1 · 189–265 bp · + trni-cat-1 · MT277230.1 · 189–270 bp · + trni-cat-2 · MT277230.1 · 189–270 bp · + trni-cat · MT277230.1 · 189–271 bp · + atp9 · MT277230.1 · 19,846–19,968 bp · + nad5 · MT277230.1 · 20,320–20,556 bp · + nad5 · MT277230.1 · 21,408–22,625 bp · + nad7 · MT277230.1 · 29,306–29,470 bp · + nad7 · MT277230.1 · 30,303–30,410 bp · + nad7 · MT277230.1 · 31,735–32,445 bp · + nad7 · MT277230.1 · 33,428–33,772 bp · + ccmC · MT277230.1 · 57,582–58,274 bp · + trnl-caa · MT277230.1 · 58,326–58,399 bp · + trni-caa · MT277230.1 · 58,326–58,399 bp · + 0 kb 29 kb 58 kb 87 kb 116 kb 145 kb 174 kb 203 kb 232 kb 261 kb 290 kb 319 kb Scutellaria amoena ASSEMBLY COMPONENTS 4 components 350,464 bp · 76 gene candidates Gene function Transfer RNA NADH dehydrogenase Ribosomal protein Cytochrome ATP synthase Other Ribosomal RNA

Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. This record includes 76 homology-derived gene candidates. Candidate tracks show CDS/RNA intervals from the local annotation and its original homology evidence table; recorded discontinuous parts are drawn separately. These candidates are not original NCBI gene annotations. Hover for coordinates; click a segment to open its gene page. Assembly components are concatenated in accession order for a coordinate overview; this does not establish physical connections. A circular layout does not establish a physical master-circle configuration. Biopython GenomeDiagram.

Gene-position browser

Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.

93 local segments
GeneTypeGroupAccessionStrandStartEndLength
trnfm-cautRNA candidatetranslation-rnaMT277281.1+2571264373
nad3CDS candidatenad-dehydrogenaseMT277281.1+93049657354
rps12CDS candidateribosomal-proteinMT277281.1+971010084375
nad6CDS candidatenad-dehydrogenaseMT277281.1−1700317605603
ccmFcCDS candidatecytochromeMT277281.1+2906729834768
ccmFcCDS candidatecytochromeMT277281.1+3077031339570
trnk-ttttRNA candidatetranslation-rnaMT277281.1−323113238575
trnk-uuutRNA candidatetranslation-rnaMT277281.1−323123238473
ccmBCDS candidatecytochromeMT277281.1+3463135248618
rpl10CDS candidateribosomal-proteinMT277281.1−3555436029476
nad1CDS candidatenad-dehydrogenaseMT277264.1−13291520192
nad1CDS candidatenad-dehydrogenaseMT277264.1−2767285690
rps13CDS candidateribosomal-proteinMT277264.1−37974144348
atp6CDS candidateatp-synthaseMT277264.1−1308013748669
cox2CDS candidatecytochromeMT277264.1−242432432684
cox2CDS candidatecytochromeMT277264.1−2951530213699
trnh-gugtRNA candidatetranslation-rnaMT277264.1+429004297475
trnh-gtgtRNA candidatetranslation-rnaMT277264.1+429014297474
rps4CDS candidateribosomal-proteinMT277264.1+48429494991071
rps3CDS candidateribosomal-proteinMT277264.1+496774975175
rps3CDS candidateribosomal-proteinMT277264.1+51444530631620
rpl16CDS candidateribosomal-proteinMT277264.1+5299353466474
atp8CDS candidateatp-synthaseMT277264.1+5858359107525
cox3CDS candidatecytochromeMT277264.1+5954760341795
sdh4CDS candidateotherMT277264.1+6027260720449
trns-tgatRNA candidatetranslation-rnaMT277181.1−6715387
trns-ugatRNA candidatetranslation-rnaMT277181.1−6715387
trng-gcctRNA candidatetranslation-rnaMT277181.1+1521159272
trnq-ttgtRNA candidatetranslation-rnaMT277181.1+4734480572
trnq-uugtRNA candidatetranslation-rnaMT277181.1+4734480572
trnc-gcatRNA candidatetranslation-rnaMT277181.1+192351930672
trnn-gtttRNA candidatetranslation-rnaMT277181.1+214322150372
trnn-guutRNA candidatetranslation-rnaMT277181.1+214322150372
trny-guatRNA candidatetranslation-rnaMT277181.1+222252230783
trny-gtatRNA candidatetranslation-rnaMT277181.1+222252230884
nad2CDS candidatenad-dehydrogenaseMT277181.1+2283622991156
nad2CDS candidatenad-dehydrogenaseMT277181.1+2443025068639
nad2CDS candidatenad-dehydrogenaseMT277181.1+2647126656186
rps14CDS candidateribosomal-proteinMT277181.1−4363243991360
rpl5CDS candidateribosomal-proteinMT277181.1−4393644487552
cobCDS candidatecytochromeMT277181.1−51682528601179
cox1CDS candidatecytochromeMT277181.1−5830459302999
cox1CDS candidatecytochromeMT277181.1−6012960845717
rps10CDS candidateribosomal-proteinMT277181.1−7527975407129
rps10CDS candidateribosomal-proteinMT277181.1−7623476512279
trnw-ccatRNA candidatetranslation-rnaMT277181.1−785967866974
nad9CDS candidatenad-dehydrogenaseMT277181.1−7910279671570
rrn26-1rRNA candidateribosomal-rnaMT277181.1+88157915603404
rrn26-2rRNA candidateribosomal-rnaMT277181.1+88157915603404
rrn26rRNA candidateribosomal-rnaMT277181.1+88157915613405
rrn18rRNA candidateribosomal-rnaMT277181.1+1034241051101687
trnf-gaatRNA candidatetranslation-rnaMT277181.1+10515310520250
trnl-uaatRNA candidatetranslation-rnaMT277181.1+10515310520250
nad4CDS candidatenad-dehydrogenaseMT277181.1−11487511496187
nad4CDS candidatenad-dehydrogenaseMT277181.1−117816118235420
nad4CDS candidatenad-dehydrogenaseMT277181.1−120421120933513
nad4CDS candidatenad-dehydrogenaseMT277181.1−122338122787450
trnd-gtctRNA candidatetranslation-rnaMT277181.1+12552412560077
trnfm-cat-1tRNA candidatetranslation-rnaMT277181.1−13733613740772
trnfm-cat-2tRNA candidatetranslation-rnaMT277181.1−13733613740772
trnmtRNA candidatetranslation-rnaMT277181.1−13733613740772
trnfm-cattRNA candidatetranslation-rnaMT277181.1−13733613740873
trne-ttctRNA candidatetranslation-rnaMT277181.1+14197814204972
trne-uuctRNA candidatetranslation-rnaMT277181.1+14197814204972
trnd-guctRNA candidatetranslation-rnaMT277181.1+14494614502883
trns-gcttRNA candidatetranslation-rnaMT277181.1+14494614502883
trns-gcutRNA candidatetranslation-rnaMT277181.1+14494614502883
trnf-gaatRNA candidatetranslation-rnaMT277181.1+14538514545874
trnl-uaatRNA candidatetranslation-rnaMT277181.1+14538514545874
trnp-tggtRNA candidatetranslation-rnaMT277181.1+14571314578775
trnp-uggtRNA candidatetranslation-rnaMT277181.1+14571314578775
ccmFnCDS candidatecytochromeMT277181.1+1494531511831731
nad4LCDS candidatenad-dehydrogenaseMT277181.1+164839165138300
atp4CDS candidateatp-synthaseMT277181.1+165315165908594
atp1CDS candidateatp-synthaseMT277181.1+1744341759511518
trni-cautRNA candidatetranslation-rnaMT277230.1+18926577
trnm-cattRNA candidatetranslation-rnaMT277230.1+18926577
trnm-cautRNA candidatetranslation-rnaMT277230.1+18926577
trni-cat-1tRNA candidatetranslation-rnaMT277230.1+18927082
trni-cat-2tRNA candidatetranslation-rnaMT277230.1+18927082
trni-cattRNA candidatetranslation-rnaMT277230.1+18927183
atp9CDS candidateatp-synthaseMT277230.1+1984619968123
nad5CDS candidatenad-dehydrogenaseMT277230.1+2032020556237
nad5CDS candidatenad-dehydrogenaseMT277230.1+21408226251218
nad7CDS candidatenad-dehydrogenaseMT277230.1+2930629470165
nad7CDS candidatenad-dehydrogenaseMT277230.1+3030330410108
nad7CDS candidatenad-dehydrogenaseMT277230.1+3173532445711
nad7CDS candidatenad-dehydrogenaseMT277230.1+3342833772345
matRCDS candidateotherMT277230.1−44994469581965
mttBCDS candidateotherMT277230.1−4829149124834
ccmCCDS candidatecytochromeMT277230.1+5758258274693
trni-caatRNA candidatetranslation-rnaMT277230.1+583265839974
trnl-caatRNA candidatetranslation-rnaMT277230.1+583265839974

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources
Mitochondrial genomeMT277281.1Mitochondrial genomeMT277264.1Mitochondrial genomeMT277181.1Mitochondrial genomeMT277230.1DNA · rps12NC_057255