LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 gene sequences

Coordinate-aware organelle record

Salvia hispanica mitochondrial genome

Available CM056166.1 313,444 bp 77 gene candidates
DNA resources Accession record
Salvia hispanica mitochondrial Biopython GenomeDiagram 1.79; GenBank local location segments. trne-ttc · CM056166.1 · 12,773–12,844 bp · − trne-uuc · CM056166.1 · 12,773–12,844 bp · − sdh4 · CM056166.1 · 42,425–42,598 bp · − cox3 · CM056166.1 · 42,529–43,323 bp · − atp8 · CM056166.1 · 43,847–44,368 bp · − cox2 · CM056166.1 · 45,868–45,951 bp · − cox2 · CM056166.1 · 48,393–49,061 bp · − trns-tga · CM056166.1 · 53,369–53,455 bp · − trns-uga · CM056166.1 · 53,369–53,455 bp · − trnh-gtg · CM056166.1 · 61,582–61,655 bp · − trnh-gug · CM056166.1 · 61,582–61,656 bp · − ccmB · CM056166.1 · 68,202–68,810 bp · − rrn18 · CM056166.1 · 84,747–86,640 bp · − rpl16 · CM056166.1 · 94,754–95,227 bp · − rps3 · CM056166.1 · 95,157–96,746 bp · − rps3 · CM056166.1 · 98,264–98,386 bp · − rps3 · CM056166.1 · 113,014–113,091 bp · − rps4 · CM056166.1 · 98,871–99,956 bp · − atp9 · CM056166.1 · 116,125–116,247 bp · − trnw-cca · CM056166.1 · 118,818–118,891 bp · − nad9 · CM056166.1 · 119,509–120,078 bp · − trnq-ttg · CM056166.1 · 202,427–202,498 bp · − trnq-uug · CM056166.1 · 202,427–202,498 bp · − cob · CM056166.1 · 215,090–216,271 bp · − rps14 · CM056166.1 · 216,772–216,996 bp · − rpl5 · CM056166.1 · 217,063–217,614 bp · − ccmC · CM056166.1 · 244,950–245,642 bp · − nad5 · CM056166.1 · 300,164–301,381 bp · − nad5 · CM056166.1 · 302,219–302,455 bp · − trns-gga · CM056166.1 · 304,565–304,651 bp · − trnd-gtc · CM056166.1 · 305,285–305,361 bp · − nad4 · CM056166.1 · 3–128 bp · + nad4 · CM056166.1 · 2,940–3,017 bp · + nad4 · CM056166.1 · 308,121–308,570 bp · + nad4 · CM056166.1 · 309,974–310,486 bp · + nad4 · CM056166.1 · 313,141–313,443 bp · + ccmFc · CM056166.1 · 4,286–5,047 bp · + ccmFc · CM056166.1 · 5,981–6,529 bp · + trnv-gac · CM056166.1 · 8,570–8,641 bp · + trni-gau · CM056166.1 · 10,657–10,744 bp · + atp6 · CM056166.1 · 18,240–18,908 bp · + rps13 · CM056166.1 · 31,431–31,778 bp · + mttB · CM056166.1 · 55,758–56,549 bp · + matR · CM056166.1 · 57,891–59,843 bp · + rpl10 · CM056166.1 · 67,410–67,895 bp · + trnk-ttt · CM056166.1 · 70,027–70,101 bp · + trnk-uuu · CM056166.1 · 70,028–70,100 bp · + trng-gcc · CM056166.1 · 74,234–74,305 bp · + trnf-gaa · CM056166.1 · 86,677–86,730 bp · + trnf-gaa · CM056166.1 · 132,255–132,328 bp · + trnl-uaa · CM056166.1 · 86,677–86,730 bp · + trnl-uaa · CM056166.1 · 132,255–132,328 bp · + atp1 · CM056166.1 · 88,006–89,523 bp · + nad1 · CM056166.1 · 126,176–126,265 bp · + nad1 · CM056166.1 · 127,504–127,695 bp · + trns-gct · CM056166.1 · 131,817–131,904 bp · + trnd-guc · CM056166.1 · 131,817–131,904 bp · + trns-gcu · CM056166.1 · 131,817–131,904 bp · + trnp-tgg · CM056166.1 · 132,594–132,668 bp · + trnp-ugg · CM056166.1 · 132,594–132,668 bp · + nad4L · CM056166.1 · 158,061–158,360 bp · + atp4 · CM056166.1 · 158,537–159,130 bp · + nad7 · CM056166.1 · 163,309–163,473 bp · + nad7 · CM056166.1 · 164,283–164,390 bp · + nad7 · CM056166.1 · 165,735–166,445 bp · + nad7 · CM056166.1 · 167,672–168,049 bp · + trnc-gca · CM056166.1 · 180,047–180,118 bp · + trnn-gtt · CM056166.1 · 182,169–182,240 bp · + trnn-guu · CM056166.1 · 182,169–182,240 bp · + trny-gua · CM056166.1 · 182,963–183,045 bp · + trny-gta · CM056166.1 · 182,963–183,046 bp · + nad2 · CM056166.1 · 183,554–183,709 bp · + nad2 · CM056166.1 · 185,135–185,773 bp · + nad2 · CM056166.1 · 187,160–187,345 bp · + rrn26-1 · CM056166.1 · 192,899–196,305 bp · + rrn26-2 · CM056166.1 · 192,899–196,305 bp · + rrn26 · CM056166.1 · 192,901–196,306 bp · + trnfm-cat · CM056166.1 · 196,514–196,587 bp · + trnfm-cau · CM056166.1 · 196,514–196,587 bp · + trnfm-cat-1 · CM056166.1 · 196,514–196,587 bp · + trnfm-cat-2 · CM056166.1 · 196,514–196,587 bp · + trnm · CM056166.1 · 196,515–196,587 bp · + ccmFn · CM056166.1 · 233,227–234,963 bp · + trnm-cat · CM056166.1 · 253,016–253,092 bp · + trnm-cau · CM056166.1 · 253,016–253,092 bp · + trni-cau · CM056166.1 · 253,016–253,092 bp · + trni-cat-1 · CM056166.1 · 253,016–253,097 bp · + trni-cat-2 · CM056166.1 · 253,016–253,097 bp · + trni-cat · CM056166.1 · 253,016–253,098 bp · + rps10 · CM056166.1 · 259,592–259,856 bp · + nad3 · CM056166.1 · 272,351–272,704 bp · + rps12 · CM056166.1 · 272,756–273,130 bp · + cox1 · CM056166.1 · 293,363–294,082 bp · + cox1 · CM056166.1 · 295,041–295,901 bp · + nad6 · CM056166.1 · 297,191–297,805 bp · + 0 kb 26 kb 52 kb 78 kb 104 kb 130 kb 156 kb 182 kb 208 kb 234 kb 260 kb 286 kb Salvia hispanica ANNOTATED MITOGENOME CM056166.1 313,444 bp · 77 gene candidates Gene function NADH dehydrogenase Cytochrome Transfer RNA ATP synthase Ribosomal protein Other Ribosomal RNA

Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. This record includes 77 homology-derived gene candidates. Candidate tracks show CDS/RNA intervals from the local annotation and its original homology evidence table; recorded discontinuous parts are drawn separately. These candidates are not original NCBI gene annotations. Hover for coordinates; click a segment to open its gene page. A circular layout does not establish a physical master-circle configuration. Biopython GenomeDiagram.

Gene-position browser

Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.

95 local segments
GeneTypeGroupStrandStartEndLength
nad4CDS candidatenad-dehydrogenase+3128126
nad4CDS candidatenad-dehydrogenase+2940301778
ccmFcCDS candidatecytochrome+42865047762
ccmFcCDS candidatecytochrome+59816529549
trnv-gactRNA candidatetranslation-rna+8570864172
trni-gautRNA candidatetranslation-rna+106571074488
trne-ttctRNA candidatetranslation-rna−127731284472
trne-uuctRNA candidatetranslation-rna−127731284472
atp6CDS candidateatp-synthase+1824018908669
rps13CDS candidateribosomal-protein+3143131778348
sdh4CDS candidateother−4242542598174
cox3CDS candidatecytochrome−4252943323795
atp8CDS candidateatp-synthase−4384744368522
cox2CDS candidatecytochrome−458684595184
cox2CDS candidatecytochrome−4839349061669
trns-tgatRNA candidatetranslation-rna−533695345587
trns-ugatRNA candidatetranslation-rna−533695345587
mttBCDS candidateother+5575856549792
matRCDS candidateother+57891598431953
trnh-gtgtRNA candidatetranslation-rna−615826165574
trnh-gugtRNA candidatetranslation-rna−615826165675
rpl10CDS candidateribosomal-protein+6741067895486
ccmBCDS candidatecytochrome−6820268810609
trnk-ttttRNA candidatetranslation-rna+700277010175
trnk-uuutRNA candidatetranslation-rna+700287010073
trng-gcctRNA candidatetranslation-rna+742347430572
rrn18rRNA candidateribosomal-rna−84747866401894
trnf-gaatRNA candidatetranslation-rna+866778673054
trnl-uaatRNA candidatetranslation-rna+866778673054
atp1CDS candidateatp-synthase+88006895231518
rpl16CDS candidateribosomal-protein−9475495227474
rps3CDS candidateribosomal-protein−95157967461590
rps3CDS candidateribosomal-protein−9826498386123
rps4CDS candidateribosomal-protein−98871999561086
rps3CDS candidateribosomal-protein−11301411309178
atp9CDS candidateatp-synthase−116125116247123
trnw-ccatRNA candidatetranslation-rna−11881811889174
nad9CDS candidatenad-dehydrogenase−119509120078570
nad1CDS candidatenad-dehydrogenase+12617612626590
nad1CDS candidatenad-dehydrogenase+127504127695192
trnd-guctRNA candidatetranslation-rna+13181713190488
trns-gcttRNA candidatetranslation-rna+13181713190488
trns-gcutRNA candidatetranslation-rna+13181713190488
trnf-gaatRNA candidatetranslation-rna+13225513232874
trnl-uaatRNA candidatetranslation-rna+13225513232874
trnp-tggtRNA candidatetranslation-rna+13259413266875
trnp-uggtRNA candidatetranslation-rna+13259413266875
nad4LCDS candidatenad-dehydrogenase+158061158360300
atp4CDS candidateatp-synthase+158537159130594
nad7CDS candidatenad-dehydrogenase+163309163473165
nad7CDS candidatenad-dehydrogenase+164283164390108
nad7CDS candidatenad-dehydrogenase+165735166445711
nad7CDS candidatenad-dehydrogenase+167672168049378
trnc-gcatRNA candidatetranslation-rna+18004718011872
trnn-gtttRNA candidatetranslation-rna+18216918224072
trnn-guutRNA candidatetranslation-rna+18216918224072
trny-guatRNA candidatetranslation-rna+18296318304583
trny-gtatRNA candidatetranslation-rna+18296318304684
nad2CDS candidatenad-dehydrogenase+183554183709156
nad2CDS candidatenad-dehydrogenase+185135185773639
nad2CDS candidatenad-dehydrogenase+187160187345186
rrn26-1rRNA candidateribosomal-rna+1928991963053407
rrn26-2rRNA candidateribosomal-rna+1928991963053407
rrn26rRNA candidateribosomal-rna+1929011963063406
trnfm-cattRNA candidatetranslation-rna+19651419658774
trnfm-cat-1tRNA candidatetranslation-rna+19651419658774
trnfm-cat-2tRNA candidatetranslation-rna+19651419658774
trnfm-cautRNA candidatetranslation-rna+19651419658774
trnmtRNA candidatetranslation-rna+19651519658773
trnq-ttgtRNA candidatetranslation-rna−20242720249872
trnq-uugtRNA candidatetranslation-rna−20242720249872
cobCDS candidatecytochrome−2150902162711182
rps14CDS candidateribosomal-protein−216772216996225
rpl5CDS candidateribosomal-protein−217063217614552
ccmFnCDS candidatecytochrome+2332272349631737
ccmCCDS candidatecytochrome−244950245642693
trni-cautRNA candidatetranslation-rna+25301625309277
trnm-cattRNA candidatetranslation-rna+25301625309277
trnm-cautRNA candidatetranslation-rna+25301625309277
trni-cat-1tRNA candidatetranslation-rna+25301625309782
trni-cat-2tRNA candidatetranslation-rna+25301625309782
trni-cattRNA candidatetranslation-rna+25301625309883
rps10CDS candidateribosomal-protein+259592259856265
nad3CDS candidatenad-dehydrogenase+272351272704354
rps12CDS candidateribosomal-protein+272756273130375
cox1CDS candidatecytochrome+293363294082720
cox1CDS candidatecytochrome+295041295901861
nad6CDS candidatenad-dehydrogenase+297191297805615
nad5CDS candidatenad-dehydrogenase−3001643013811218
nad5CDS candidatenad-dehydrogenase−302219302455237
trns-ggatRNA candidatetranslation-rna−30456530465187
trnd-gtctRNA candidatetranslation-rna−30528530536177
nad4CDS candidatenad-dehydrogenase+308121308570450
nad4CDS candidatenad-dehydrogenase+309974310486513
nad4CDS candidatenad-dehydrogenase+313141313443303

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources
Mitochondrial genomeCM056166.1DNA · rps12NC_046838