Species pathway scientific record

Perovskia atriplicifolia

A species-level view of family assignments, traceable candidate identifiers and any linked expression context in the current pathway evidence package.

Lamiaceae rank
50
Source assignments
3,864
Public candidate records
1,908
Observed modules
90
High-confidence records
778
Expression matrix
Unavailable

Pathway composition

Six pathway classes

Candidate rate values are source-derived summaries; they are not pathway-completeness percentages.

Compare with other species

Terpenoid

Terpenoid biosynthesis

363 recordsView records
FamilyEvidence stateSource countCandidate IDsEvidence mode
BAHDBAHD acyltransferase family Stable locus 25050plantsme
CYP76Cytochrome P450 CYP76 family Stable locus 13450plantsme
FPPSFarnesyl diphosphate synthase family Stable locus 70750plantsme
UGTUDP-dependent glycosyltransferase family Stable locus 37450plantsme
TPSTerpene synthase family Stable locus 4545plantsme
CYP71Cytochrome P450 CYP71 family Stable locus 2727plantsme
IDIIsopentenyl-diphosphate isomerase family Stable locus 2626plantsme
HDS_IspGHDS / IspG enzyme-family module Stable locus 1919plantsme
DXS1-deoxy-D-xylulose 5-phosphate synthase family Stable locus 1212plantsme
HMGR3-hydroxy-3-methylglutaryl-CoA reductase family Stable locus 99plantsme
GPPSGeranyl diphosphate synthase family Stable locus 88plantsme
HDR_IspHHDR / IspH enzyme-family module Stable locus 44plantsme
MVDMVD enzyme-family module Stable locus 33plantsme
AACTAcetyl-CoA C-acetyltransferase family Stable locus 22plantsme
GGPPSGeranylgeranyl diphosphate synthase family Stable locus 22plantsme
CMK_IspECMK / IspE enzyme-family module Stable locus 11plantsme
DXR1-deoxy-D-xylulose 5-phosphate reductoisomerase family Stable locus 11plantsme
HMGS3-hydroxy-3-methylglutaryl-CoA synthase family Stable locus 11plantsme
MCT_IspDMCT / IspD enzyme-family module Stable locus 11plantsme
MDS_IspFMDS / IspF enzyme-family module Stable locus 11plantsme
MVKMVK enzyme-family module Stable locus 11plantsme

Phenylpropanoid

Phenylpropanoid biosynthesis

478 recordsView records
FamilyEvidence stateSource countCandidate IDsEvidence mode
4CL4-coumarate--CoA ligase family Stable locus 7450plantsme
C3H_CYP98Ap-coumaroyl-shikimate/quinate 3-hydroxylase (CYP98A) family Stable locus 7650plantsme
CADCinnamyl-alcohol dehydrogenase family Stable locus 7150plantsme
CCRCinnamoyl-CoA reductase family Stable locus 8850plantsme
HCTHydroxycinnamoyl-CoA shikimate/quinate transferase family Stable locus 9250plantsme
LACLAC enzyme-family module Stable locus 9650plantsme
PODClass III peroxidase family Stable locus 11250plantsme
CSECaffeoyl shikimate esterase family Stable locus 3838plantsme
C4H_CYP73ACinnamate 4-hydroxylase (CYP73A) family Stable locus 2727plantsme
COMTCaffeic-acid O-methyltransferase family Stable locus 2222plantsme
CCoAOMTCaffeoyl-CoA O-methyltransferase family Stable locus 1818plantsme
PALPhenylalanine ammonia-lyase family Stable locus 1515plantsme
F5H_CYP84AF5H / CYP84A enzyme-family module Stable locus 88plantsme

Rosmarinic acid

Rosmarinic-acid biosynthesis

0 recordsView records

No observed modules in this category

No family assignments are reported for this species in the current compatible source profile.

Flavonoid

Flavonoid biosynthesis

358 recordsView records
FamilyEvidence stateSource countCandidate IDsEvidence mode
4CL4-coumarate--CoA ligase family Stable locus 7450plantsme
DFRDihydroflavonol 4-reductase family Stable locus 4848plantsme
F3H_CYP75BF3H / CYP75B enzyme-family module Stable locus 3939plantsme
F3HFlavanone 3-hydroxylase family Stable locus 3636plantsme
C4HCinnamate 4-hydroxylase family Stable locus 3434plantsme
PALPhenylalanine ammonia-lyase family Stable locus 3030plantsme
UFGTUFGT enzyme-family module Stable locus 3030plantsme
CHIChalcone isomerase family Stable locus 2828plantsme
ANS_LDOXANS / LDOX enzyme-family module Stable locus 2626plantsme
CHSChalcone synthase family Stable locus 1616plantsme
IFRIFR enzyme-family module Stable locus 1212plantsme
ANRANR enzyme-family module Stable locus 55plantsme
F35H_CYP75AF35H / CYP75A enzyme-family module Stable locus 44plantsme

Alkaloid

Alkaloid-related biosynthesis

479 recordsView records
FamilyEvidence stateSource countCandidate IDsEvidence mode
7DLGT7DLGT enzyme-family module Stable locus 13750plantsme
NMTNMT enzyme-family module Stable locus 6350plantsme
STRSTR enzyme-family module Stable locus 9350plantsme
TRI_TRIITRI / TRII enzyme-family module Stable locus 29350plantsme
CODM_T6ODMCODM / T6ODM enzyme-family module Stable locus 3939plantsme
SGDSGD enzyme-family module Stable locus 3838plantsme
GESGES enzyme-family module Stable locus 3535plantsme
8HGO8HGO enzyme-family module Stable locus 3030plantsme
CORCOR enzyme-family module Stable locus 2121plantsme
PYKSPYKS enzyme-family module Stable locus 2020plantsme
MPOMPO enzyme-family module Stable locus 1414plantsme
ODCODC enzyme-family module Stable locus 1313plantsme
NCSNorcoclaurine synthase family Stable locus 1111plantsme
GSGS enzyme-family module Stable locus 99plantsme
PMTPMT enzyme-family module Stable locus 66plantsme
CYP80B1CYP80B1 enzyme-family module Stable locus 55plantsme
ISYISY enzyme-family module Stable locus 55plantsme
LAMTLoganic-acid O-methyltransferase family Stable locus 55plantsme
SLSSLS enzyme-family module Stable locus 55plantsme
7DLH7DLH enzyme-family module Stable locus 44plantsme
CYP719CYP719 enzyme-family module Stable locus 44plantsme
TDCTDC enzyme-family module Stable locus 44plantsme
ADCADC enzyme-family module Stable locus 33plantsme
G8O_G8HG8O / G8H enzyme-family module Stable locus 33plantsme
IOIO enzyme-family module Stable locus 33plantsme
CNMTCNMT enzyme-family module Stable locus 22plantsme

Steroid / sterol

Steroid and sterol biosynthesis

230 recordsView records
FamilyEvidence stateSource countCandidate IDsEvidence mode
CASCycloartenol synthase family Stable locus 6350plantsme
CYP51G1CYP51G1 enzyme-family module Stable locus 5950plantsme
SMT1_SMT2_SMT3SMT1 / SMT2 / SMT3 enzyme-family module Stable locus 4444plantsme
SMO1_SMO2SMO1 / SMO2 enzyme-family module Stable locus 1717plantsme
DWF7DWF7 enzyme-family module Stable locus 1313plantsme
DWF4_CYP90B1DWF4 / CYP90B1 enzyme-family module Stable locus 1010plantsme
CPD_CYP90A1CPD / CYP90A1 enzyme-family module Stable locus 88plantsme
DWF1DWF1 enzyme-family module Stable locus 77plantsme
SQS_FDFT1Squalene synthase / FDFT1 family Stable locus 77plantsme
SQESQE enzyme-family module Stable locus 66plantsme
DET2DET2 enzyme-family module Stable locus 55plantsme
BR6OX1_CYP85A1BR6OX1 / CYP85A1 enzyme-family module Stable locus 44plantsme
FKFK enzyme-family module Stable locus 44plantsme
HYD1HYD1 enzyme-family module Stable locus 22plantsme
BR6OX2_CYP85A2BR6OX2 / CYP85A2 enzyme-family module Stable locus 11plantsme
CPI1CPI1 enzyme-family module Stable locus 11plantsme
ROT3_CYP90C1ROT3 / CYP90C1 enzyme-family module Stable locus 11plantsme

Interpretation

Evidence boundary

Stable locus

A concrete candidate identifier is provided and can be inspected.

Reference-only

A family count is available, but no locus ID is asserted for this module.

Computational candidates

Computational enzyme-family candidates and genome-structure support, not validated biochemical function.