Species pathway scientific record

Teucrium marum

A species-level view of family assignments, traceable candidate identifiers and any linked expression context in the current pathway evidence package.

Lamiaceae rank
33
Source assignments
10,387
Public candidate records
2,707
Observed modules
90
High-confidence records
1,413
Expression matrix
Unavailable

Pathway composition

Six pathway classes

Candidate rate values are source-derived summaries; they are not pathway-completeness percentages.

Compare with other species

Terpenoid

Terpenoid biosynthesis

506 recordsView records
FamilyEvidence stateSource countCandidate IDsEvidence mode
BAHDBAHD acyltransferase family Stable locus 71450plantsme
CYP71Cytochrome P450 CYP71 family Stable locus 7050plantsme
CYP76Cytochrome P450 CYP76 family Stable locus 37050plantsme
FPPSFarnesyl diphosphate synthase family Stable locus 1,97350plantsme
IDIIsopentenyl-diphosphate isomerase family Stable locus 11350plantsme
TPSTerpene synthase family Stable locus 20450plantsme
UGTUDP-dependent glycosyltransferase family Stable locus 80650plantsme
DXS1-deoxy-D-xylulose 5-phosphate synthase family Stable locus 4646plantsme
HDS_IspGHDS / IspG enzyme-family module Stable locus 3232plantsme
AACTAcetyl-CoA C-acetyltransferase family Stable locus 1616plantsme
HDR_IspHHDR / IspH enzyme-family module Stable locus 1212plantsme
HMGR3-hydroxy-3-methylglutaryl-CoA reductase family Stable locus 1111plantsme
MVDMVD enzyme-family module Stable locus 99plantsme
GGPPSGeranylgeranyl diphosphate synthase family Stable locus 77plantsme
GPPSGeranyl diphosphate synthase family Stable locus 77plantsme
CMK_IspECMK / IspE enzyme-family module Stable locus 33plantsme
HMGS3-hydroxy-3-methylglutaryl-CoA synthase family Stable locus 33plantsme
MCT_IspDMCT / IspD enzyme-family module Stable locus 33plantsme
MVKMVK enzyme-family module Stable locus 33plantsme
DXR1-deoxy-D-xylulose 5-phosphate reductoisomerase family Stable locus 22plantsme
MDS_IspFMDS / IspF enzyme-family module Stable locus 22plantsme

Phenylpropanoid

Phenylpropanoid biosynthesis

597 recordsView records
FamilyEvidence stateSource countCandidate IDsEvidence mode
4CL4-coumarate--CoA ligase family Stable locus 18350plantsme
C3H_CYP98Ap-coumaroyl-shikimate/quinate 3-hydroxylase (CYP98A) family Stable locus 17650plantsme
C4H_CYP73ACinnamate 4-hydroxylase (CYP73A) family Stable locus 7050plantsme
CADCinnamyl-alcohol dehydrogenase family Stable locus 26650plantsme
CCRCinnamoyl-CoA reductase family Stable locus 25950plantsme
CCoAOMTCaffeoyl-CoA O-methyltransferase family Stable locus 8150plantsme
COMTCaffeic-acid O-methyltransferase family Stable locus 9550plantsme
CSECaffeoyl shikimate esterase family Stable locus 12150plantsme
HCTHydroxycinnamoyl-CoA shikimate/quinate transferase family Stable locus 27950plantsme
LACLAC enzyme-family module Stable locus 22550plantsme
PODClass III peroxidase family Stable locus 22050plantsme
F5H_CYP84AF5H / CYP84A enzyme-family module Stable locus 3636plantsme
PALPhenylalanine ammonia-lyase family Stable locus 1111plantsme

Rosmarinic acid

Rosmarinic-acid biosynthesis

0 recordsView records

No observed modules in this category

No family assignments are reported for this species in the current compatible source profile.

Flavonoid

Flavonoid biosynthesis

489 recordsView records
FamilyEvidence stateSource countCandidate IDsEvidence mode
4CL4-coumarate--CoA ligase family Stable locus 18650plantsme
C4HCinnamate 4-hydroxylase family Stable locus 8450plantsme
CHIChalcone isomerase family Stable locus 5850plantsme
DFRDihydroflavonol 4-reductase family Stable locus 17750plantsme
F3HFlavanone 3-hydroxylase family Stable locus 8750plantsme
F3H_CYP75BF3H / CYP75B enzyme-family module Stable locus 12050plantsme
UFGTUFGT enzyme-family module Stable locus 5450plantsme
ANS_LDOXANS / LDOX enzyme-family module Stable locus 4444plantsme
IFRIFR enzyme-family module Stable locus 4040plantsme
PALPhenylalanine ammonia-lyase family Stable locus 2323plantsme
CHSChalcone synthase family Stable locus 2121plantsme
F35H_CYP75AF35H / CYP75A enzyme-family module Stable locus 88plantsme
ANRANR enzyme-family module Stable locus 33plantsme

Alkaloid

Alkaloid-related biosynthesis

702 recordsView records
FamilyEvidence stateSource countCandidate IDsEvidence mode
7DLGT7DLGT enzyme-family module Stable locus 40950plantsme
8HGO8HGO enzyme-family module Stable locus 5950plantsme
CODM_T6ODMCODM / T6ODM enzyme-family module Stable locus 9050plantsme
CORCOR enzyme-family module Stable locus 9350plantsme
GESGES enzyme-family module Stable locus 15950plantsme
NMTNMT enzyme-family module Stable locus 24650plantsme
SGDSGD enzyme-family module Stable locus 7250plantsme
STRSTR enzyme-family module Stable locus 19950plantsme
TRI_TRIITRI / TRII enzyme-family module Stable locus 62650plantsme
NCSNorcoclaurine synthase family Stable locus 4747plantsme
ODCODC enzyme-family module Stable locus 2929plantsme
GSGS enzyme-family module Stable locus 2727plantsme
PYKSPYKS enzyme-family module Stable locus 2525plantsme
G8O_G8HG8O / G8H enzyme-family module Stable locus 1919plantsme
PMTPMT enzyme-family module Stable locus 1717plantsme
CYP719CYP719 enzyme-family module Stable locus 1616plantsme
MPOMPO enzyme-family module Stable locus 1414plantsme
7DLH7DLH enzyme-family module Stable locus 1313plantsme
ADCADC enzyme-family module Stable locus 1212plantsme
TDCTDC enzyme-family module Stable locus 77plantsme
CNMTCNMT enzyme-family module Stable locus 66plantsme
SLSSLS enzyme-family module Stable locus 66plantsme
ISYISY enzyme-family module Stable locus 55plantsme
IOIO enzyme-family module Stable locus 33plantsme
XMT_MXMT_DXMTXMT / MXMT / DXMT enzyme-family module Stable locus 33plantsme
LAMTLoganic-acid O-methyltransferase family Stable locus 22plantsme
T16HT16H enzyme-family module Stable locus 11plantsme

Steroid / sterol

Steroid and sterol biosynthesis

413 recordsView records
FamilyEvidence stateSource countCandidate IDsEvidence mode
CASCycloartenol synthase family Stable locus 20850plantsme
CYP51G1CYP51G1 enzyme-family module Stable locus 19750plantsme
DWF1DWF1 enzyme-family module Stable locus 6150plantsme
SMT1_SMT2_SMT3SMT1 / SMT2 / SMT3 enzyme-family module Stable locus 17050plantsme
SMO1_SMO2SMO1 / SMO2 enzyme-family module Stable locus 3838plantsme
DET2DET2 enzyme-family module Stable locus 3333plantsme
DWF4_CYP90B1DWF4 / CYP90B1 enzyme-family module Stable locus 3030plantsme
DWF7DWF7 enzyme-family module Stable locus 3030plantsme
FKFK enzyme-family module Stable locus 2323plantsme
CPD_CYP90A1CPD / CYP90A1 enzyme-family module Stable locus 2020plantsme
SQS_FDFT1Squalene synthase / FDFT1 family Stable locus 1515plantsme
HYD1HYD1 enzyme-family module Stable locus 1010plantsme
BR6OX1_CYP85A1BR6OX1 / CYP85A1 enzyme-family module Stable locus 66plantsme
SQESQE enzyme-family module Stable locus 44plantsme
CPI1CPI1 enzyme-family module Stable locus 33plantsme
ROT3_CYP90C1ROT3 / CYP90C1 enzyme-family module Stable locus 11plantsme

Interpretation

Evidence boundary

Stable locus

A concrete candidate identifier is provided and can be inspected.

Reference-only

A family count is available, but no locus ID is asserted for this module.

Computational candidates

Computational enzyme-family candidates and genome-structure support, not validated biochemical function.