Species pathway scientific record

Mentha x piperita

A species-level view of family assignments, traceable candidate identifiers and any linked expression context in the current pathway evidence package.

Lamiaceae rank
53
Source assignments
4,584
Public candidate records
2,038
Observed modules
92
High-confidence records
843
Expression matrix
Unavailable

Pathway composition

Six pathway classes

Candidate rate values are source-derived summaries; they are not pathway-completeness percentages.

Compare with other species

Terpenoid

Terpenoid biosynthesis

377 recordsView records
FamilyEvidence stateSource countCandidate IDsEvidence mode
BAHDBAHD acyltransferase family Stable locus 28950plantsme
CYP76Cytochrome P450 CYP76 family Stable locus 16650plantsme
FPPSFarnesyl diphosphate synthase family Stable locus 76750plantsme
TPSTerpene synthase family Stable locus 8350plantsme
UGTUDP-dependent glycosyltransferase family Stable locus 46850plantsme
CYP71Cytochrome P450 CYP71 family Stable locus 3131plantsme
IDIIsopentenyl-diphosphate isomerase family Stable locus 2727plantsme
HDS_IspGHDS / IspG enzyme-family module Stable locus 2222plantsme
DXS1-deoxy-D-xylulose 5-phosphate synthase family Stable locus 1212plantsme
HDR_IspHHDR / IspH enzyme-family module Stable locus 88plantsme
HMGR3-hydroxy-3-methylglutaryl-CoA reductase family Stable locus 88plantsme
GPPSGeranyl diphosphate synthase family Stable locus 66plantsme
MVDMVD enzyme-family module Stable locus 33plantsme
AACTAcetyl-CoA C-acetyltransferase family Stable locus 22plantsme
GGPPSGeranylgeranyl diphosphate synthase family Stable locus 22plantsme
CMK_IspECMK / IspE enzyme-family module Stable locus 11plantsme
DXR1-deoxy-D-xylulose 5-phosphate reductoisomerase family Stable locus 11plantsme
HMGS3-hydroxy-3-methylglutaryl-CoA synthase family Stable locus 11plantsme
MCT_IspDMCT / IspD enzyme-family module Stable locus 11plantsme
MDS_IspFMDS / IspF enzyme-family module Stable locus 11plantsme
MVKMVK enzyme-family module Stable locus 11plantsme

Phenylpropanoid

Phenylpropanoid biosynthesis

528 recordsView records
FamilyEvidence stateSource countCandidate IDsEvidence mode
4CL4-coumarate--CoA ligase family Stable locus 8750plantsme
C3H_CYP98Ap-coumaroyl-shikimate/quinate 3-hydroxylase (CYP98A) family Stable locus 8450plantsme
CADCinnamyl-alcohol dehydrogenase family Stable locus 7850plantsme
CCRCinnamoyl-CoA reductase family Stable locus 9550plantsme
HCTHydroxycinnamoyl-CoA shikimate/quinate transferase family Stable locus 14150plantsme
LACLAC enzyme-family module Stable locus 10150plantsme
PALPhenylalanine ammonia-lyase family Stable locus 7850plantsme
PODClass III peroxidase family Stable locus 14950plantsme
CSECaffeoyl shikimate esterase family Stable locus 4444plantsme
COMTCaffeic-acid O-methyltransferase family Stable locus 2424plantsme
F5H_CYP84AF5H / CYP84A enzyme-family module Stable locus 2323plantsme
C4H_CYP73ACinnamate 4-hydroxylase (CYP73A) family Stable locus 2121plantsme
CCoAOMTCaffeoyl-CoA O-methyltransferase family Stable locus 1616plantsme

Rosmarinic acid

Rosmarinic-acid biosynthesis

0 recordsView records

No observed modules in this category

No family assignments are reported for this species in the current compatible source profile.

Flavonoid

Flavonoid biosynthesis

390 recordsView records
FamilyEvidence stateSource countCandidate IDsEvidence mode
4CL4-coumarate--CoA ligase family Stable locus 8750plantsme
F3H_CYP75BF3H / CYP75B enzyme-family module Stable locus 5250plantsme
PALPhenylalanine ammonia-lyase family Stable locus 6450plantsme
UFGTUFGT enzyme-family module Stable locus 4747plantsme
DFRDihydroflavonol 4-reductase family Stable locus 4444plantsme
F3HFlavanone 3-hydroxylase family Stable locus 3636plantsme
CHIChalcone isomerase family Stable locus 3131plantsme
C4HCinnamate 4-hydroxylase family Stable locus 2828plantsme
ANS_LDOXANS / LDOX enzyme-family module Stable locus 2121plantsme
CHSChalcone synthase family Stable locus 1515plantsme
IFRIFR enzyme-family module Stable locus 1010plantsme
ANRANR enzyme-family module Stable locus 44plantsme
F35H_CYP75AF35H / CYP75A enzyme-family module Stable locus 44plantsme

Alkaloid

Alkaloid-related biosynthesis

515 recordsView records
FamilyEvidence stateSource countCandidate IDsEvidence mode
7DLGT7DLGT enzyme-family module Stable locus 16050plantsme
GESGES enzyme-family module Stable locus 5650plantsme
NMTNMT enzyme-family module Stable locus 8350plantsme
SGDSGD enzyme-family module Stable locus 5750plantsme
STRSTR enzyme-family module Stable locus 6950plantsme
TRI_TRIITRI / TRII enzyme-family module Stable locus 34150plantsme
CODM_T6ODMCODM / T6ODM enzyme-family module Stable locus 3838plantsme
8HGO8HGO enzyme-family module Stable locus 2424plantsme
CORCOR enzyme-family module Stable locus 2424plantsme
NCSNorcoclaurine synthase family Stable locus 1515plantsme
ODCODC enzyme-family module Stable locus 1515plantsme
MPOMPO enzyme-family module Stable locus 1414plantsme
7DLH7DLH enzyme-family module Stable locus 1111plantsme
SLSSLS enzyme-family module Stable locus 1111plantsme
PYKSPYKS enzyme-family module Stable locus 1010plantsme
CYP719CYP719 enzyme-family module Stable locus 99plantsme
GSGS enzyme-family module Stable locus 99plantsme
PMTPMT enzyme-family module Stable locus 99plantsme
ADCADC enzyme-family module Stable locus 66plantsme
IOIO enzyme-family module Stable locus 66plantsme
CYP80B1CYP80B1 enzyme-family module Stable locus 33plantsme
LAMTLoganic-acid O-methyltransferase family Stable locus 33plantsme
CNMTCNMT enzyme-family module Stable locus 22plantsme
CYP80F1CYP80F1 enzyme-family module Stable locus 11plantsme
ISYISY enzyme-family module Stable locus 11plantsme
T16HT16H enzyme-family module Stable locus 11plantsme
TDCTDC enzyme-family module Stable locus 11plantsme
TYDC_DDCTYDC / DDC enzyme-family module Stable locus 11plantsme
XMT_MXMT_DXMTXMT / MXMT / DXMT enzyme-family module Stable locus 11plantsme

Steroid / sterol

Steroid and sterol biosynthesis

228 recordsView records
FamilyEvidence stateSource countCandidate IDsEvidence mode
CASCycloartenol synthase family Stable locus 13250plantsme
CYP51G1CYP51G1 enzyme-family module Stable locus 5950plantsme
SMT1_SMT2_SMT3SMT1 / SMT2 / SMT3 enzyme-family module Stable locus 4141plantsme
SMO1_SMO2SMO1 / SMO2 enzyme-family module Stable locus 1818plantsme
DWF7DWF7 enzyme-family module Stable locus 1717plantsme
CPD_CYP90A1CPD / CYP90A1 enzyme-family module Stable locus 1010plantsme
DET2DET2 enzyme-family module Stable locus 99plantsme
DWF4_CYP90B1DWF4 / CYP90B1 enzyme-family module Stable locus 77plantsme
DWF1DWF1 enzyme-family module Stable locus 66plantsme
BR6OX1_CYP85A1BR6OX1 / CYP85A1 enzyme-family module Stable locus 55plantsme
FKFK enzyme-family module Stable locus 44plantsme
SQS_FDFT1Squalene synthase / FDFT1 family Stable locus 44plantsme
SQESQE enzyme-family module Stable locus 33plantsme
HYD1HYD1 enzyme-family module Stable locus 22plantsme
CPI1CPI1 enzyme-family module Stable locus 11plantsme
ROT3_CYP90C1ROT3 / CYP90C1 enzyme-family module Stable locus 11plantsme

Interpretation

Evidence boundary

Stable locus

A concrete candidate identifier is provided and can be inspected.

Reference-only

A family count is available, but no locus ID is asserted for this module.

Computational candidates

Computational enzyme-family candidates and genome-structure support, not validated biochemical function.