terpenoid
Terpenoid biosynthesis
- Rate / 1k
- 41.175
- Candidate records
- 395
- Stable modules
- 20
- Reference-only
- 0
Species pathway scientific record
Salvia bowleyana
A species-level view of family assignments, traceable candidate identifiers and any linked expression context in the current pathway evidence package.
- Lamiaceae rank
- 45
- Source assignments
- 5,105
- Public candidate records
- 2,038
- Observed modules
- 97
- High-confidence records
- 922
- Expression matrix
- Unavailable
Pathway composition
Six pathway classes
Candidate rate values are source-derived summaries; they are not pathway-completeness percentages.
phenylpropanoid
Phenylpropanoid biosynthesis
- Rate / 1k
- 22.029
- Candidate records
- 524
- Stable modules
- 13
- Reference-only
- 0
rosmarinic acid
Rosmarinic-acid biosynthesis
- Rate / 1k
- 16.829
- Candidate records
- 5
- Stable modules
- 1
- Reference-only
- 6
flavonoid
Flavonoid biosynthesis
- Rate / 1k
- 9.13
- Candidate records
- 360
- Stable modules
- 15
- Reference-only
- 0
alkaloid
Alkaloid-related biosynthesis
- Rate / 1k
- 19.622
- Candidate records
- 507
- Stable modules
- 26
- Reference-only
- 0
- Rate / 1k
- 7.154
- Candidate records
- 247
- Stable modules
- 16
- Reference-only
- 0
Terpenoid
Terpenoid biosynthesis
395 recordsView records
Phenylpropanoid
Phenylpropanoid biosynthesis
524 recordsView records
| Family | Evidence state | Source count | Candidate IDs | Evidence mode | |
|---|---|---|---|---|---|
4CL4-coumarate--CoA ligase family | Stable locus | 80 | 50 | plantsme | |
C3H_CYP98Ap-coumaroyl-shikimate/quinate 3-hydroxylase (CYP98A) family | Stable locus | 76 | 50 | plantsme | |
CADCinnamyl-alcohol dehydrogenase family | Stable locus | 111 | 50 | plantsme | |
CCRCinnamoyl-CoA reductase family | Stable locus | 90 | 50 | plantsme | |
CSECaffeoyl shikimate esterase family | Stable locus | 54 | 50 | plantsme | |
HCTHydroxycinnamoyl-CoA shikimate/quinate transferase family | Stable locus | 177 | 50 | plantsme | |
LACLAC enzyme-family module | Stable locus | 148 | 50 | plantsme | |
PODClass III peroxidase family | Stable locus | 110 | 50 | plantsme | |
C4H_CYP73ACinnamate 4-hydroxylase (CYP73A) family | Stable locus | 49 | 49 | plantsme | |
COMTCaffeic-acid O-methyltransferase family | Stable locus | 37 | 37 | plantsme | |
CCoAOMTCaffeoyl-CoA O-methyltransferase family | Stable locus | 28 | 28 | plantsme | |
F5H_CYP84AF5H / CYP84A enzyme-family module | Stable locus | 9 | 9 | plantsme | |
PALPhenylalanine ammonia-lyase family | Stable locus | 1 | 1 | plantsme |
Rosmarinic acid
Rosmarinic-acid biosynthesis
5 recordsView records
| Family | Evidence state | Source count | Candidate IDs | Evidence mode | |
|---|---|---|---|---|---|
PALPhenylalanine ammonia-lyase family | Stable locus | 7 | 5 | gene tree | |
4CL4-coumarate--CoA ligase family | Reference-only | 79 | 0 | family count | — |
C4HCinnamate 4-hydroxylase family | Reference-only | 353 | 0 | family count | — |
CPRCytochrome P450 reductase family | Reference-only | 27 | 0 | family count | — |
HPPRHydroxyphenylpyruvate reductase family | Reference-only | 50 | 0 | family count | — |
RASRosmarinic-acid synthase family | Reference-only | 100 | 0 | family count | — |
TATTyrosine aminotransferase family | Reference-only | 125 | 0 | family count | — |
Flavonoid
Flavonoid biosynthesis
360 recordsView records
| Family | Evidence state | Source count | Candidate IDs | Evidence mode | |
|---|---|---|---|---|---|
4CL4-coumarate--CoA ligase family | Stable locus | 86 | 50 | plantsme | |
C4HCinnamate 4-hydroxylase family | Stable locus | 54 | 50 | plantsme | |
F3H_CYP75BF3H / CYP75B enzyme-family module | Stable locus | 52 | 50 | plantsme | |
CHIChalcone isomerase family | Stable locus | 41 | 41 | plantsme | |
DFRDihydroflavonol 4-reductase family | Stable locus | 40 | 40 | plantsme | |
F3HFlavanone 3-hydroxylase family | Stable locus | 35 | 35 | plantsme | |
ANS_LDOXANS / LDOX enzyme-family module | Stable locus | 32 | 32 | plantsme | |
UFGTUFGT enzyme-family module | Stable locus | 20 | 20 | plantsme | |
CHSChalcone synthase family | Stable locus | 12 | 12 | plantsme | |
IFRIFR enzyme-family module | Stable locus | 11 | 11 | plantsme | |
PALPhenylalanine ammonia-lyase family | Stable locus | 7 | 7 | plantsme | |
ANRANR enzyme-family module | Stable locus | 5 | 5 | plantsme | |
F35H_CYP75AF35H / CYP75A enzyme-family module | Stable locus | 5 | 5 | plantsme | |
FNSFNS enzyme-family module | Stable locus | 1 | 1 | plantsme | |
IFSIFS enzyme-family module | Stable locus | 1 | 1 | plantsme |
Alkaloid
Alkaloid-related biosynthesis
507 recordsView records
Steroid / sterol
Steroid and sterol biosynthesis
247 recordsView records
Interpretation
Evidence boundary
Stable locus
A concrete candidate identifier is provided and can be inspected.
Reference-only
A family count is available, but no locus ID is asserted for this module.
Computational candidates
Computational enzyme-family candidates and genome-structure support, not validated biochemical function.