terpenoid
Terpenoid biosynthesis
- Rate / 1k
- 52.001
- Candidate records
- 382
- Stable modules
- 21
- Reference-only
- 0
Species pathway scientific record
Scutellaria barbata
A species-level view of family assignments, traceable candidate identifiers and any linked expression context in the current pathway evidence package.
- Lamiaceae rank
- 37
- Source assignments
- 4,765
- Public candidate records
- 1,973
- Observed modules
- 99
- High-confidence records
- 849
- Expression matrix
- Unavailable
Pathway composition
Six pathway classes
Candidate rate values are source-derived summaries; they are not pathway-completeness percentages.
phenylpropanoid
Phenylpropanoid biosynthesis
- Rate / 1k
- 22.977
- Candidate records
- 528
- Stable modules
- 13
- Reference-only
- 0
rosmarinic acid
Rosmarinic-acid biosynthesis
- Rate / 1k
- 20.256
- Candidate records
- 4
- Stable modules
- 1
- Reference-only
- 6
flavonoid
Flavonoid biosynthesis
- Rate / 1k
- 9.723
- Candidate records
- 320
- Stable modules
- 13
- Reference-only
- 0
alkaloid
Alkaloid-related biosynthesis
- Rate / 1k
- 25.205
- Candidate records
- 490
- Stable modules
- 27
- Reference-only
- 0
- Rate / 1k
- 7.726
- Candidate records
- 249
- Stable modules
- 18
- Reference-only
- 0
Terpenoid
Terpenoid biosynthesis
382 recordsView records
Phenylpropanoid
Phenylpropanoid biosynthesis
528 recordsView records
| Family | Evidence state | Source count | Candidate IDs | Evidence mode | |
|---|---|---|---|---|---|
4CL4-coumarate--CoA ligase family | Stable locus | 65 | 50 | plantsme | |
C3H_CYP98Ap-coumaroyl-shikimate/quinate 3-hydroxylase (CYP98A) family | Stable locus | 66 | 50 | plantsme | |
CADCinnamyl-alcohol dehydrogenase family | Stable locus | 69 | 50 | plantsme | |
CCRCinnamoyl-CoA reductase family | Stable locus | 87 | 50 | plantsme | |
HCTHydroxycinnamoyl-CoA shikimate/quinate transferase family | Stable locus | 124 | 50 | plantsme | |
LACLAC enzyme-family module | Stable locus | 98 | 50 | plantsme | |
PODClass III peroxidase family | Stable locus | 107 | 50 | plantsme | |
CSECaffeoyl shikimate esterase family | Stable locus | 49 | 49 | plantsme | |
COMTCaffeic-acid O-methyltransferase family | Stable locus | 41 | 41 | plantsme | |
C4H_CYP73ACinnamate 4-hydroxylase (CYP73A) family | Stable locus | 36 | 36 | plantsme | |
CCoAOMTCaffeoyl-CoA O-methyltransferase family | Stable locus | 28 | 28 | plantsme | |
PALPhenylalanine ammonia-lyase family | Stable locus | 13 | 13 | plantsme | |
F5H_CYP84AF5H / CYP84A enzyme-family module | Stable locus | 11 | 11 | plantsme |
Rosmarinic acid
Rosmarinic-acid biosynthesis
4 recordsView records
| Family | Evidence state | Source count | Candidate IDs | Evidence mode | |
|---|---|---|---|---|---|
PALPhenylalanine ammonia-lyase family | Stable locus | 8 | 4 | gene tree | |
4CL4-coumarate--CoA ligase family | Reference-only | 63 | 0 | family count | — |
C4HCinnamate 4-hydroxylase family | Reference-only | 367 | 0 | family count | — |
CPRCytochrome P450 reductase family | Reference-only | 22 | 0 | family count | — |
HPPRHydroxyphenylpyruvate reductase family | Reference-only | 26 | 0 | family count | — |
RASRosmarinic-acid synthase family | Reference-only | 108 | 0 | family count | — |
TATTyrosine aminotransferase family | Reference-only | 106 | 0 | family count | — |
Flavonoid
Flavonoid biosynthesis
320 recordsView records
| Family | Evidence state | Source count | Candidate IDs | Evidence mode | |
|---|---|---|---|---|---|
4CL4-coumarate--CoA ligase family | Stable locus | 65 | 50 | plantsme | |
DFRDihydroflavonol 4-reductase family | Stable locus | 51 | 50 | plantsme | |
C4HCinnamate 4-hydroxylase family | Stable locus | 41 | 41 | plantsme | |
F3HFlavanone 3-hydroxylase family | Stable locus | 39 | 39 | plantsme | |
F3H_CYP75BF3H / CYP75B enzyme-family module | Stable locus | 39 | 39 | plantsme | |
CHIChalcone isomerase family | Stable locus | 27 | 27 | plantsme | |
ANS_LDOXANS / LDOX enzyme-family module | Stable locus | 25 | 25 | plantsme | |
UFGTUFGT enzyme-family module | Stable locus | 18 | 18 | plantsme | |
IFRIFR enzyme-family module | Stable locus | 11 | 11 | plantsme | |
PALPhenylalanine ammonia-lyase family | Stable locus | 9 | 9 | plantsme | |
CHSChalcone synthase family | Stable locus | 6 | 6 | plantsme | |
F35H_CYP75AF35H / CYP75A enzyme-family module | Stable locus | 3 | 3 | plantsme | |
ANRANR enzyme-family module | Stable locus | 2 | 2 | plantsme |
Alkaloid
Alkaloid-related biosynthesis
490 recordsView records
Steroid / sterol
Steroid and sterol biosynthesis
249 recordsView records
Interpretation
Evidence boundary
Stable locus
A concrete candidate identifier is provided and can be inspected.
Reference-only
A family count is available, but no locus ID is asserted for this module.
Computational candidates
Computational enzyme-family candidates and genome-structure support, not validated biochemical function.